| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2039 |
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| Symbol | |
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| ID | 1220879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2211668 |
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| End bp | 2212858 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238433 |
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| Product | ABC transporter permease |
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| Protein accession | NP_520160 |
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| Protein GI | 17546758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.995222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.266776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGC CACCGTTCTC CCTCGACATT CCCGCGCGCA TGCCGCTGCT GTCGCGGTGG
GGCTGGTCCG TGCTGGCGGC GGCGGCGCTG CTGGTCTGCG TCGGCGTGCC GGTGTGCGCG
CTGGCGGTGC CGGCGGGGCA TCCGCTGCAC CTGTCGGCCT ATGCGCTCAC GCTGGTGGGC
AAGATCATGT GCTACGCGCT GGCCGCGCTG GCGCTCGACC TGGTGTGGGG CTACTGCGGC
ATCCTGAGCC TCGGCCACGG CCTGTTCTTC GCGCTCGGCG GCTATGCGAT GGGGATGTAC
CTGATGCGCG CCATCGGCCG CGACGGTGTG TACCAGAGCG ATCTGCCCGA TTTCATGGTC
TTCCTCGACT GGAAGGAACT GCCCTGGTTC TGGCACGGCA CCGGGCATTT CGCCTGGGCC
GCGCTGCTGG TGGTGCTGGT GCCGGGCGTG CTGGCGTGGC TGTTCGGCTT CTTCGCGTTC
CGCTCGCGGG TCAAGGGCGT GTACCTGTCG ATCATCACGC AGGCCATGAC CTACGCGGCC
ATGCTGCTGT TCTTCCGCAA CGAAACGGGC TTCGGCGGCA ACAACGGCTT CACCGATTTC
AAGCGCATCC TCGGATACCC GATTGCAGCG GTGTCCACGC GCACGGTGCT GTTCGTCGCC
ACCTTCATCG CGCTGGTGCT GGCCTTCATC GCATGCCGGG CCATCGTCAC CTCCAAGTTC
GGGCGCGTGG TGACGGCCAT CCGCGACGCC GAGGCGCGCG TGATGTTCTC CGGCTACAGC
CCGCTCGGCT ACAAGCTGTT CGTGTGGACC TTCTCGGCCG TGCTGTGCGG TATCGCCGGG
GCGCTGTACG TGCCGCAGGT CGGCATCATC AACCCGAGCG AGATGTCGCC GGGCAACTCG
ATCGAGATGG CGGTGTGGGT GGCCGTGGGC GGGCGCGGCA CGCTGGTTGG CCCGATCGTC
GGCGCGTTCC TCGTCAATGG CGCCAAGACC GTCCTGACGG CCTGGGTGCC GGAGTACTGG
CTGTTCGTGC TGGGCGCGGT CTTCGTGCTG GTGACCCTGT TCCTGCCGAA CGGCGTGCTG
GGCCTGCTGC GTGGCCGCTC CGGGCGGCGC GTGCGGCCGG CGGCCGATGG CCGTGCGGAT
GCCGGCGCCG GCGAGCCCGT TGTCACCCCG CCCGCCGGAG ACCGCGCATG A
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| Protein sequence | MAQPPFSLDI PARMPLLSRW GWSVLAAAAL LVCVGVPVCA LAVPAGHPLH LSAYALTLVG
KIMCYALAAL ALDLVWGYCG ILSLGHGLFF ALGGYAMGMY LMRAIGRDGV YQSDLPDFMV
FLDWKELPWF WHGTGHFAWA ALLVVLVPGV LAWLFGFFAF RSRVKGVYLS IITQAMTYAA
MLLFFRNETG FGGNNGFTDF KRILGYPIAA VSTRTVLFVA TFIALVLAFI ACRAIVTSKF
GRVVTAIRDA EARVMFSGYS PLGYKLFVWT FSAVLCGIAG ALYVPQVGII NPSEMSPGNS
IEMAVWVAVG GRGTLVGPIV GAFLVNGAKT VLTAWVPEYW LFVLGAVFVL VTLFLPNGVL
GLLRGRSGRR VRPAADGRAD AGAGEPVVTP PAGDRA
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