| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2038 |
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| Symbol | |
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| ID | 1220878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2210808 |
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| End bp | 2211671 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238432 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_520159 |
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| Protein GI | 17546757 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.6748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.231581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCCT TCACCGCACG CCCCGACCGC GCGCAGGTCG GAAACTTCAG CGGCACCACC
ACCGGCATGG GCCACGTGCT CGAGCCGGAC GCCATCGACG TCTCGCACGG CCCCATCCTG
TACCTCGAAG ACGTGACGGT GCGCTTCGGC GGCTTCCGCG CGCTGAACGC GCTGACGCTG
TCGATCGACC ACGGCGAGCT GCGCTGCGTG ATCGGCCCCA ACGGCGCTGG CAAGACCACG
ATGATGGATG TGATCACCGG CAAGACCGGT CCGCGCAACG CGGACGTCGC CGGCCGCGTC
TACCTGGGCC AGGCCATCGA CCTGCTGCGC CTGACCGAGC CGCGCATCGC GCAGATCGGC
ATCGGCCGCA AGTTCCAGAA GCCGACCGTG TTCGAGCAGC ACGGCGTGTG GGAAAACCTC
GAGCTGGCGA TGCAGGCCGA CAAGCGCTGG TGGGTGTCGC TGCGCGCGCG GCTGCTCGAC
GACGGCCGCC GCCGCATCGA AGAGACGCTC GGTCGCATCG GGCTGGAGGC CGAGGCGTAC
CGGAGCGCCG GCCTGCTGTC GCACGGCCAG AAGCAGCGGC TGGAGATCGG CATGCTGCTG
ATGCAGCGGC CGCAGCTGCT GCTGCTCGAC GAGCCCGTGG CCGGCATGAC CGATGAAGAG
ACGATGCAGC TGGCCGACCT GCTCAACGGC CTGCGCGGCG CGTGCTCGAT CATGGTGGTG
GAGCACGACA TGGAGTTCGT CGCCGCGCTG GCGGGCGAGA CGGGCCGCGT GACCGTGCTG
GCCGAAGGCA GCGTGCTGGC CGAGGGCACG CTCGACGCGG TCAAGCGCGA CGCGCGCGTG
ATCGAATCCT ACCTGGGGCG CTAA
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| Protein sequence | MRPFTARPDR AQVGNFSGTT TGMGHVLEPD AIDVSHGPIL YLEDVTVRFG GFRALNALTL
SIDHGELRCV IGPNGAGKTT MMDVITGKTG PRNADVAGRV YLGQAIDLLR LTEPRIAQIG
IGRKFQKPTV FEQHGVWENL ELAMQADKRW WVSLRARLLD DGRRRIEETL GRIGLEAEAY
RSAGLLSHGQ KQRLEIGMLL MQRPQLLLLD EPVAGMTDEE TMQLADLLNG LRGACSIMVV
EHDMEFVAAL AGETGRVTVL AEGSVLAEGT LDAVKRDARV IESYLGR
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