| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2036 |
|---|
| Symbol | ureD |
|---|
| ID | 1220876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2209115 |
|---|
| End bp | 2210002 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637238430 |
|---|
| Product | urease accessory protein ureD |
|---|
| Protein accession | NP_520157 |
|---|
| Protein GI | 17546755 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0829] Urease accessory protein UreH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.133178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.368181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC CCGATTTTCC CGTTCCGCCC CGGATCGATG CATTCGCCTC CTGGGAAGCC
TCGCTGCGGC TCGCATTCGC GCGCCGGGGC GGGCGCACCG TGCTGGCATC GTGCCGGCAC
CGGGGGCCGC TGCGCGTGCA GAAGGCGCTG TATCCGGAAG GCGAGGGCGT CTGCCATGTC
GTGCTGCTGC ATCCGCCCGC GGGCATCGCC GGCGGCGACG TGCTCGACAT CGGCATCGAG
CTGGGTGCCG AGGCGCATGC GGTGCTGACC ACACCGGGCG CCACCAAGTG GTACAAGTCG
CCCGGCCGCA CCGCCATGCA GCAGGTGGCC ATCCGCCTGG ACGCCGGCGC GCGGCTCGAC
TGGCTGCCGC AGGAGAACAT CGTTTTCAAC CAGGCGCGCC CGGTCATCGA CCTGACGCTG
GACCTCGCCC CGGGCGCCGC CGCCATCGGC TGGGACATCA CCATGCTCGG CCGTCATGCT
GCCGGCGAGT CCTGGCAGGA AGGCCGCATC GCCATGCACA CGCGCCTGCG CTGCGAGGGG
CAGCCGCTGT GGATCGAGTC CACGGCGTTC GATGCCCAGT CGCCCGTGCT GGGCGCGACG
ACGGGCATGG CCGGCTTTCA CGTGGTCGGC ACGCTGTGGG CCGTGGGGGC GGGCGCCACT
GAAGCCCTTG CCGAGACACT GGCCGAGCAA CTGCCTTACC GCGACGATCT CCGCGCCGGC
GTGACGTGCC TGACGCAAGA CGCGCCCGGC CGCCCGAGCG TGCTGCTGCT GCGCGTGCTG
GCACGGCGGC CCGAAGACGC GCGCGCCCTG CTGAGCCAGA CCTGGCTGGC GCTGCGCGAA
CCGATCCATG GCGTGGCGGG CCGTCCGCTG CGCCTGTGGG CGACGTGA
|
|---|
| Protein sequence | MRHPDFPVPP RIDAFASWEA SLRLAFARRG GRTVLASCRH RGPLRVQKAL YPEGEGVCHV
VLLHPPAGIA GGDVLDIGIE LGAEAHAVLT TPGATKWYKS PGRTAMQQVA IRLDAGARLD
WLPQENIVFN QARPVIDLTL DLAPGAAAIG WDITMLGRHA AGESWQEGRI AMHTRLRCEG
QPLWIESTAF DAQSPVLGAT TGMAGFHVVG TLWAVGAGAT EALAETLAEQ LPYRDDLRAG
VTCLTQDAPG RPSVLLLRVL ARRPEDARAL LSQTWLALRE PIHGVAGRPL RLWAT
|
|---|
| |