Gene RSc2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2021 
Symbol 
ID1220861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2199521 
End bp2200213 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID637238415 
Productputative GST-related protein 
Protein accessionNP_520142 
Protein GI17546740 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.398836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.122618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TCTACAGCTG GGCCACACCC AACGGGCACA AGGTTCACAT CATGCTGGAG 
GAATGCGGAC TGCCCTACCG CGTCCATGCC GTCAACATCG GCGCTGGCGA CCAGTTCAAG
CCCGAGTTCC TGAAGATCAG CCCGAACAAC AAGATTCCGG CCATCGTCGA CCAGGACGGA
CCGGACGGCC AGCCGATCTC GCTGTTCGAG TCGGGGGCCA TCCTGCTGTA CCTCGCCGGC
AAAACCGGCA AGTTCCTGCC CGAGGACGTG CGCGGCAAGT ACGAGGTGCT GCAATGGCTG
ATGTTCCAGA TGGGCGGCGT CGGCCCGATG CTCGGCCAGA CGCACCACTT CCGCATCTAC
GCGCCCGAGA AGATCGACTA CGCGATCAAC CGCTATACCA ACGAGGCCAA GCGCCTGTAT
GGCGTGATCG ACAAGCGCCT GTCGGAATCC AAGTACCTGG GCGGCCCGGA CTACTCCATC
GCCGACATCG CCACCTGGCC GTGGCTGCGC AGCTGGCAGA ACCAGGGGAT CGTGCTGTCG
GACTACCCCA GGCTGCAGCG CTGGTTCGAG GCCATCGAGG CGCGCCCCGC CGTGCAGCGC
GCGGTGAAGG TGCTGGCCAA GGAACGCTCG CCCCTGCAGG ACGACAAAGA ACGCGAGGTG
CTGTTCGGCG CGACGCAATA CGCGCGCCGC TAG
 
Protein sequence
MIDVYSWATP NGHKVHIMLE ECGLPYRVHA VNIGAGDQFK PEFLKISPNN KIPAIVDQDG 
PDGQPISLFE SGAILLYLAG KTGKFLPEDV RGKYEVLQWL MFQMGGVGPM LGQTHHFRIY
APEKIDYAIN RYTNEAKRLY GVIDKRLSES KYLGGPDYSI ADIATWPWLR SWQNQGIVLS
DYPRLQRWFE AIEARPAVQR AVKVLAKERS PLQDDKEREV LFGATQYARR