Gene RSc2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2017 
Symbol 
ID1220857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2195928 
End bp2196332 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID637238411 
Producthypothetical protein 
Protein accessionNP_520138 
Protein GI17546736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.131595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.188182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG ACGGCGCATG GACCTTCGAC CACGTGAACT TCAGCGTGGC GGGCGAACCG 
GCCATCCTCA AATTCTTCGC CGATGTGCTC GGCTGGCAGC CCGGTCATCG GCCGCCGTTT
CCGGTGCCCG GCGCCTGGCT GTACCAGGGC CAGGATGCGC TGGTCCACCT GGTGGCGACC
GAAGGGGATG CGCCCGGGCT GGTGTTTTCG CACATCGCCT TCCGGACCAC GCAGGATGCG
GCCGATGTGC TGGCCAGGGT GCGCGCGAGC GGCATGCCGC ATCGCGTGCA GTCGCATCCG
GAGCGCGCGG CCGCGCAGAT CTTCGTGCAA CTGCCGGGCG CGGTGGTGCT GGAGCTGGAG
GCGCGCCTGT CCGGTCCGCT GGACGGCGCG CGCGACGCCG GCTGA
 
Protein sequence
MTSDGAWTFD HVNFSVAGEP AILKFFADVL GWQPGHRPPF PVPGAWLYQG QDALVHLVAT 
EGDAPGLVFS HIAFRTTQDA ADVLARVRAS GMPHRVQSHP ERAAAQIFVQ LPGAVVLELE
ARLSGPLDGA RDAG