Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2016 |
Symbol | |
ID | 1220856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2194834 |
End bp | 2195910 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238410 |
Product | hypothetical protein |
Protein accession | NP_520137 |
Protein GI | 17546735 |
COG category | [R] General function prediction only |
COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.120817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.141117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC AGGATTTCTC GGCCTTCGAG GGCACCCGCC CGGTGGCGGA ACAGCAGCGG TTCGACATCG GCGCGCTGGA GGCCTGGATG CGCGGCCACG TGGAGGGCTT CGCCGGGCCG CTGTCGGTCG AGCAGTTCAA GGGCGGCCAG TCCAACCCCA CCTTCAAGCT CATCACGCCG TCGCGCACCT ACGTGATGCG CGCCAAGCCG GGGCCCAAGG CCAAGCTGCT GCCATCGGCG CACGCCATCG AGCGCGAATA CCGCGTGATG GACGCCCTGG CCCGAACCGA TGTGCCGGTC GCGAAGATGT TCGCGCTGTG CGAGGACGAG TCCGTCATCG GCCGCGCCTT CTACATCATG GAATTCGTGC AGGGCCGCGT GCTGTGGGAC CAGGCCCTGC CCGGCATGAC GCGCGACGAG CGCGGCGCCA TCTACGACGA GATGAACCGC GTGATCGCCG CGCTGCACAG CGTGGACCAC GCCGCCATCG GCCTGGCCGA TTTCGGCAAG CCGGGCAACT ACTTCGCGCG CCAGATCGAG CGCTGGAGCC GGCAGTACAA GCTGTCGGAG ACCGAGTCGA TCCCGGCCAT GGACAGCCTG ATCGACTGGC TGCCCGAGCA CGTGCCGCAC GAGGCCGACG AAGTGACCCG CATCGTGCAC GGCGACTACC GGCTCGACAA CCTGATCTTC CACCCGAGCG AGCCGCGCGT GCTGGCCATC CTCGACTGGG AGCTGTCGAC GCTGGGCCAT CCGCTGGCCG ACTTCAGCTA CCACTGCATG AGCTGGCACA TCGCGCCGGG GCAGTTCCGC GGCATCGCGG GGCTGGACCA TGCGGCGCTC GGCATTCCCA CCGAGGCCGA GTACATCCGC CGCTACGAAG CGCGCACCGG CCGCCGCATC ACCGGCGACT GGAACTTCTA CCTCGCCTAC AACATGTTCC GCATCGCCGG CATCCTGCAG GGGATCATGA AGCGCGTGGT GGACGGCACC GCGTCGTCCG CGCAGGCGCT GGAGGCCGGC AAGCGCGCCC GTCCGATGGC CGAGCTGGGC TGGCAGTACG CCCGGCAGGC CGGCTGA
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Protein sequence | MTQQDFSAFE GTRPVAEQQR FDIGALEAWM RGHVEGFAGP LSVEQFKGGQ SNPTFKLITP SRTYVMRAKP GPKAKLLPSA HAIEREYRVM DALARTDVPV AKMFALCEDE SVIGRAFYIM EFVQGRVLWD QALPGMTRDE RGAIYDEMNR VIAALHSVDH AAIGLADFGK PGNYFARQIE RWSRQYKLSE TESIPAMDSL IDWLPEHVPH EADEVTRIVH GDYRLDNLIF HPSEPRVLAI LDWELSTLGH PLADFSYHCM SWHIAPGQFR GIAGLDHAAL GIPTEAEYIR RYEARTGRRI TGDWNFYLAY NMFRIAGILQ GIMKRVVDGT ASSAQALEAG KRARPMAELG WQYARQAG
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