Gene RSc2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2012 
Symbol 
ID1220852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2190975 
End bp2191631 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID637238406 
Productgst-related protein 
Protein accessionNP_520133 
Protein GI17546731 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.844191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0196648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TGTACGGCTT TGCCGCGAGC AACTACTACA ACAAGGTCAA GCTCGCGCTG 
ATGGAGAAGG GCATTCCCTT CGAGGAAGCG CTGCGCTGGC CCGACCAGAC CGACGGCGAC
CTCTCGCCGC TGCACAAGGT GCCTTACATG GTGGGCGAAG ACGGGGGGAT GTGCGAATCG
CAGGTCATCG TCGATTACCT CGAGGCGCGC TATCCGCAGC CTCCGCTGAT GCCGGCCGAC
CCGTTCCAGG CGGCCAAGGT GCGCGAGATC ATCACCTTCC TGGAGCTGCA CCTGGAGCTG
GTGGCGCGCC AGCTGTATCC GGAGGCGTTC TTCGGCGGCA AGATCAGCGA CAACTTCAAG
GCCCGGGTGC GCGAGCAACT GCAGAAGAAC ATCCCCGCGA CGGCCCGGCT GCTGAAGTTC
GCACCCTATG TGGCGGGCGA CACCTTCACG ATCGCGGATT GCGCGGCCAT CGTGCACTTC
CCGCTGATCA GCTCGGCCAC CAAGATCATC TACGGCGAAG ACCTGCTCGC GCCCATCGAG
GGCCTCAAGC CGTACCTTGC CAGGATGGGC GAGATGCCCA ACGTGCAGCG CGTGAACGCC
GAGCGCAAGG TGAACACCGA GCAGATGCTC GCGTACTACG CCGGCAAGCG CCAGTAA
 
Protein sequence
MLKLYGFAAS NYYNKVKLAL MEKGIPFEEA LRWPDQTDGD LSPLHKVPYM VGEDGGMCES 
QVIVDYLEAR YPQPPLMPAD PFQAAKVREI ITFLELHLEL VARQLYPEAF FGGKISDNFK
ARVREQLQKN IPATARLLKF APYVAGDTFT IADCAAIVHF PLISSATKII YGEDLLAPIE
GLKPYLARMG EMPNVQRVNA ERKVNTEQML AYYAGKRQ