Gene RSc2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2009 
Symbol 
ID1220849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2188431 
End bp2189204 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID637238403 
Producthypothetical protein 
Protein accessionNP_520130 
Protein GI17546728 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0486502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG TCCTCTCGCC GGCCAAGTCG CTGGACTACG ATACACCGCC GCGCATCAAG 
ACCCACACGC TGCCCGATTT CATCGAGCGC TCCGCTGTCC TGATCGAAAC GCTGCGCAAG
CTTTCCCCGG CCCAGATCGG CACGCTGATG CACATCTCCG ACCCGCTGGC GGTGCTCAAC
GCCAACCGCT ACGCCGACTG GTCCACCGAG TTCACCGCCG ACAACAGCAA GCAGGCCGTG
CTCGCCTTCG ACGGCGATGT CTACGGCGGG CTCGATGCCA ACACGCTGTC GGCCGACGAT
CTGCAGTTCG CGCAGCAGCA TCTGCGGATC CTGTCGGGCC TGTACGGCGT GCTGCGCCCG
CTCGACCGGA TGCAGCCGTA CCGGCTCGAG ATGGGCACGC GCCTGGCCAA TCCGGGCGGC
AAGGATCTCT ACGCGTTCTG GGGCGACGAC GTCACGCTCG CGCTCAACGC GCTGCTCCAG
GCGGACGACG ACCCGGTCCT GGTCAACCTG GCCTCCGAGG AGTACTTCAA GGTGGTGCGG
CCCAAGGTGC TGAAGGCGCG CATCGTCACG CCCGTCTTCG AAGACTGGAA GGGCGGCCGG
TACAAGATCA TCTCGTTCTA TGCCAAGCGG GCGCGCGGGC TGATGGCGCG CTATGCGATC
GAGCACCGCA TCGCCGATCC GCGCAAGCTC AAGCACTTCG ACGCGGAAGG CTACGCGTTT
GCCGCCGAAG CCTCCGACGA TGAGCGCTGG GTCTTCCGCC GCAAGGCCGC CTGA
 
Protein sequence
MIIVLSPAKS LDYDTPPRIK THTLPDFIER SAVLIETLRK LSPAQIGTLM HISDPLAVLN 
ANRYADWSTE FTADNSKQAV LAFDGDVYGG LDANTLSADD LQFAQQHLRI LSGLYGVLRP
LDRMQPYRLE MGTRLANPGG KDLYAFWGDD VTLALNALLQ ADDDPVLVNL ASEEYFKVVR
PKVLKARIVT PVFEDWKGGR YKIISFYAKR ARGLMARYAI EHRIADPRKL KHFDAEGYAF
AAEASDDERW VFRRKAA