Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2009 |
Symbol | |
ID | 1220849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2188431 |
End bp | 2189204 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238403 |
Product | hypothetical protein |
Protein accession | NP_520130 |
Protein GI | 17546728 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0486502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG TCCTCTCGCC GGCCAAGTCG CTGGACTACG ATACACCGCC GCGCATCAAG ACCCACACGC TGCCCGATTT CATCGAGCGC TCCGCTGTCC TGATCGAAAC GCTGCGCAAG CTTTCCCCGG CCCAGATCGG CACGCTGATG CACATCTCCG ACCCGCTGGC GGTGCTCAAC GCCAACCGCT ACGCCGACTG GTCCACCGAG TTCACCGCCG ACAACAGCAA GCAGGCCGTG CTCGCCTTCG ACGGCGATGT CTACGGCGGG CTCGATGCCA ACACGCTGTC GGCCGACGAT CTGCAGTTCG CGCAGCAGCA TCTGCGGATC CTGTCGGGCC TGTACGGCGT GCTGCGCCCG CTCGACCGGA TGCAGCCGTA CCGGCTCGAG ATGGGCACGC GCCTGGCCAA TCCGGGCGGC AAGGATCTCT ACGCGTTCTG GGGCGACGAC GTCACGCTCG CGCTCAACGC GCTGCTCCAG GCGGACGACG ACCCGGTCCT GGTCAACCTG GCCTCCGAGG AGTACTTCAA GGTGGTGCGG CCCAAGGTGC TGAAGGCGCG CATCGTCACG CCCGTCTTCG AAGACTGGAA GGGCGGCCGG TACAAGATCA TCTCGTTCTA TGCCAAGCGG GCGCGCGGGC TGATGGCGCG CTATGCGATC GAGCACCGCA TCGCCGATCC GCGCAAGCTC AAGCACTTCG ACGCGGAAGG CTACGCGTTT GCCGCCGAAG CCTCCGACGA TGAGCGCTGG GTCTTCCGCC GCAAGGCCGC CTGA
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Protein sequence | MIIVLSPAKS LDYDTPPRIK THTLPDFIER SAVLIETLRK LSPAQIGTLM HISDPLAVLN ANRYADWSTE FTADNSKQAV LAFDGDVYGG LDANTLSADD LQFAQQHLRI LSGLYGVLRP LDRMQPYRLE MGTRLANPGG KDLYAFWGDD VTLALNALLQ ADDDPVLVNL ASEEYFKVVR PKVLKARIVT PVFEDWKGGR YKIISFYAKR ARGLMARYAI EHRIADPRKL KHFDAEGYAF AAEASDDERW VFRRKAA
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