Gene RSc2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2001 
Symbol 
ID1220841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2178037 
End bp2178594 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID637238395 
Productsignal peptide protein 
Protein accessionNP_520122 
Protein GI17546720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.840181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.420987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT TCATCGTGGG CGCCTGTGCC GGCGTGCTTT CGCTGGCCGC ATCGCAGTAC 
GCCAGCGCCC AGCCCACCAC GTCCGCCAAG CCGGCCGCCA AGAAGGCAAC GGCGAAAAAG
AAGGCCGCCA AGAAAGGCGC ACCCGCCAAG GAAGTGGCCG CCAAGCCGGA AGGCGTGCTG
TGGAAGTGCG AACTCGGCAA CGAGATGTAC ATCGCGGGCG ACATGACGCG TGACCAGGTC
GTCACGATGC ACTGGAAGGG CCGCAACTAT CAGCTGCCGC GTCAATTGAC CCGCACCGGC
GCCGACCGCT ACTTCGACCA GCGGACCGGC ATGGACCTGG TGGTGATCCC CGCCAAGGCC
ATGCTGTTCG ACCGCAACGA AGGCCACCGC CTGGCCGACG AGTGCCAGAC CGCGGAAATG
GCCGCGGGCG CACCGGCCCC GACGCAAGGC GGCGCCCTGC GCGCGCCGGC CGGCCTGCCG
CTGATGATGC AGGACAACGC CGCACCGGCG CCCGCTCCGG CCCCCACGCC GGACGCCACG
CAACCGGCCA AGCCGTAA
 
Protein sequence
MNKFIVGACA GVLSLAASQY ASAQPTTSAK PAAKKATAKK KAAKKGAPAK EVAAKPEGVL 
WKCELGNEMY IAGDMTRDQV VTMHWKGRNY QLPRQLTRTG ADRYFDQRTG MDLVVIPAKA
MLFDRNEGHR LADECQTAEM AAGAPAPTQG GALRAPAGLP LMMQDNAAPA PAPAPTPDAT
QPAKP