Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2001 |
Symbol | |
ID | 1220841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2178037 |
End bp | 2178594 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238395 |
Product | signal peptide protein |
Protein accession | NP_520122 |
Protein GI | 17546720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.840181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.420987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT TCATCGTGGG CGCCTGTGCC GGCGTGCTTT CGCTGGCCGC ATCGCAGTAC GCCAGCGCCC AGCCCACCAC GTCCGCCAAG CCGGCCGCCA AGAAGGCAAC GGCGAAAAAG AAGGCCGCCA AGAAAGGCGC ACCCGCCAAG GAAGTGGCCG CCAAGCCGGA AGGCGTGCTG TGGAAGTGCG AACTCGGCAA CGAGATGTAC ATCGCGGGCG ACATGACGCG TGACCAGGTC GTCACGATGC ACTGGAAGGG CCGCAACTAT CAGCTGCCGC GTCAATTGAC CCGCACCGGC GCCGACCGCT ACTTCGACCA GCGGACCGGC ATGGACCTGG TGGTGATCCC CGCCAAGGCC ATGCTGTTCG ACCGCAACGA AGGCCACCGC CTGGCCGACG AGTGCCAGAC CGCGGAAATG GCCGCGGGCG CACCGGCCCC GACGCAAGGC GGCGCCCTGC GCGCGCCGGC CGGCCTGCCG CTGATGATGC AGGACAACGC CGCACCGGCG CCCGCTCCGG CCCCCACGCC GGACGCCACG CAACCGGCCA AGCCGTAA
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Protein sequence | MNKFIVGACA GVLSLAASQY ASAQPTTSAK PAAKKATAKK KAAKKGAPAK EVAAKPEGVL WKCELGNEMY IAGDMTRDQV VTMHWKGRNY QLPRQLTRTG ADRYFDQRTG MDLVVIPAKA MLFDRNEGHR LADECQTAEM AAGAPAPTQG GALRAPAGLP LMMQDNAAPA PAPAPTPDAT QPAKP
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