| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1993 |
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| Symbol | sdhB |
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| ID | 1220833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2170085 |
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| End bp | 2170786 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238387 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | NP_520114 |
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| Protein GI | 17546712 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.17727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.46163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTA TTTTTGAAGT CTATCGCTAC GATCCGGACA AGGACGCAGC CCCCCGCATG
CAGACCTACG AGGTCGAGCT CGACGGCCAT GAGCGCATGC TGCTCGACGC ACTGGTCAAG
CTGAAGAAGC TGGACGAGTC GATCGCGTTC CGCCGCTCGT GCCGCGAAGG CGTGTGCGGC
TCCGACGCCA TGAACATCAA CGGCAAGAAT GGTCTGGCCT GCCTGACCAA CATGCGCGAG
CTGCCCGAGA AGATCGTGCT GCGTCCGCTG CCGGGCCTGC CCGTGGTGCG CGACCTGATC
GTCGACATGA CGCAGTTCTT CAACCAGTAC CACTCGATCA AGCCGTTCCT GATCAACGAC
GAGCCGCCGC CCGAGAAGGA GCGCCTGCAG TCGCCGGAAG AGCGCGAAGA GCTCGACGGC
CTGTACGAGT GCATCCTGTG CGCGAGCTGC TCGACGTCGT GCCCGTCGTT CTGGTGGAAC
CCAGACAAGT TCGTCGGCCC GGCCGGCCTG CTGCAGGCCT ACCGTTTCAT CGCCGACAGC
CGCGACCAGG CGACCAGCGA GCGCCTCGAC AACCTCGAGG ACCCGTACCG CCTGTTCCGC
TGCCACACCA TCATGAACTG CGTCGATGTG TGCCCGAAGG GTCTGAACCC GACCAAGGCC
ATCGGCAAGA TCAAGGAACT GATGGTGCGC CGCGCGGTGT AA
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| Protein sequence | MKRIFEVYRY DPDKDAAPRM QTYEVELDGH ERMLLDALVK LKKLDESIAF RRSCREGVCG
SDAMNINGKN GLACLTNMRE LPEKIVLRPL PGLPVVRDLI VDMTQFFNQY HSIKPFLIND
EPPPEKERLQ SPEEREELDG LYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS
RDQATSERLD NLEDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
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