Gene RSc1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1991 
SymbolgltA 
ID1220831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2168327 
End bp2169628 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content63% 
IMG OID637238385 
Producttype II citrate synthase 
Protein accessionNP_520112 
Protein GI17546710 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.179438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.357874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT CCGATGTGAA AGCCACCCTA TCGTTTTCCG ATGGCTCGCC CAGCGTCGAG 
TTGCCGATCT ACACGGGCAC GGTTGGCCCG GACGTGATCG ACATCCGCAA GCTGTACGGC
CAGACGGGCA AGTTCACCTA CGACCCCGGC TTCATGTCGA CCGCGTCGTG CAACTCCAAG
ATCACCTATA TCGATGGCGA CAAGGGCGAG CTGCTCTATC GCGGCTACGC CATCGACGAT
CTGGCGGGCA AGTGCGACTT CCTGGAAATC TGCTACCTGC TGCTCAAGGG CGAGCTGCCC
AACGCCAAGC AGAAGGATGA GTTCAACAGC ACCGTCATGA ACCACACCAT GGTGCATGAG
CAGATGCAGT TCTTCCTGCG CGGCTTCCGT CGCGATGCGC ATCCGATGGC CGTGCTGACC
GGCCTGGTGG GCGCCATGAG CGCGTTCTAT CCGGATGCCG CCAACATCAA CGATTCGCGC
GAGCGCGAGA TCTCGCAGAT CCGCCTGATC GCCAAGCTGC CGACACTGGT GGCGATGGCC
TACAAGTACA ACATCGGCCA GCCGCTGATC TACCCGCAGA ACAACCTGTC CTACACCGGC
AACTTCATGC GCATGATGTT CGCCACGCCG TGCGAGGACT ACAAGGTCAA CCCGGTGCTT
GAGCGCGCGC TCGACCGCAT CTTCATCCTG CACGCCGACC ACGAGCAGAA CGCCTCGACC
TCGACGGTGC GCCTGGCTGG CTCCTCGGGC ACCAACCCGA TCGCCGCCAT TGCAGCCGGC
ATCGCCTGCC TGTGGGGCCC GGCGCACGGC GGCGCGAACG AAGCGGCGCT GAACATGCTG
GAAGAGATCG GCAGCGTCGA CAAGATCGAT GAGTTCATCA AGCAGGTCAA GGACAAGAAC
AGCGGCGTGC GCCTGATGGG CTTCGGCCAC CGCGTGTACA AGAACTACGA TCCGCGCGCC
AAGCTGATGC GTGAGACCTG CCATGAAGTG CTGCAGGAAC TCGGCCTGGA GAACGATCGC
CTGTTCAAGC TGGCCATGGC GCTCGAGAAG ATCGCGCTGG AAGACGAATA CTTCGTCAGC
CGCAAGCTGT ATCCGAACGT CGATTTCTAC TCGGGCATCG TGCAGCGCGC GCTGGGCATC
CCGACCTCGA TGTTCACCTG CATCTTCGCG CTGGCCCGCT CGGTGGGCTG GATCGCGCAG
TGGGAAGAGA TGATCACCGA TCCGGAATAC AAGATCGGCC GTCCGCGCCA GCTGTTCAAC
GGCGCCGCCA CCCGCGCGGT GCCCGAGCTG GGCAAGCGCT GA
 
Protein sequence
MTPSDVKATL SFSDGSPSVE LPIYTGTVGP DVIDIRKLYG QTGKFTYDPG FMSTASCNSK 
ITYIDGDKGE LLYRGYAIDD LAGKCDFLEI CYLLLKGELP NAKQKDEFNS TVMNHTMVHE
QMQFFLRGFR RDAHPMAVLT GLVGAMSAFY PDAANINDSR EREISQIRLI AKLPTLVAMA
YKYNIGQPLI YPQNNLSYTG NFMRMMFATP CEDYKVNPVL ERALDRIFIL HADHEQNAST
STVRLAGSSG TNPIAAIAAG IACLWGPAHG GANEAALNML EEIGSVDKID EFIKQVKDKN
SGVRLMGFGH RVYKNYDPRA KLMRETCHEV LQELGLENDR LFKLAMALEK IALEDEYFVS
RKLYPNVDFY SGIVQRALGI PTSMFTCIFA LARSVGWIAQ WEEMITDPEY KIGRPRQLFN
GAATRAVPEL GKR