Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1991 |
Symbol | gltA |
ID | 1220831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2168327 |
End bp | 2169628 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238385 |
Product | type II citrate synthase |
Protein accession | NP_520112 |
Protein GI | 17546710 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.179438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.357874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCCGT CCGATGTGAA AGCCACCCTA TCGTTTTCCG ATGGCTCGCC CAGCGTCGAG TTGCCGATCT ACACGGGCAC GGTTGGCCCG GACGTGATCG ACATCCGCAA GCTGTACGGC CAGACGGGCA AGTTCACCTA CGACCCCGGC TTCATGTCGA CCGCGTCGTG CAACTCCAAG ATCACCTATA TCGATGGCGA CAAGGGCGAG CTGCTCTATC GCGGCTACGC CATCGACGAT CTGGCGGGCA AGTGCGACTT CCTGGAAATC TGCTACCTGC TGCTCAAGGG CGAGCTGCCC AACGCCAAGC AGAAGGATGA GTTCAACAGC ACCGTCATGA ACCACACCAT GGTGCATGAG CAGATGCAGT TCTTCCTGCG CGGCTTCCGT CGCGATGCGC ATCCGATGGC CGTGCTGACC GGCCTGGTGG GCGCCATGAG CGCGTTCTAT CCGGATGCCG CCAACATCAA CGATTCGCGC GAGCGCGAGA TCTCGCAGAT CCGCCTGATC GCCAAGCTGC CGACACTGGT GGCGATGGCC TACAAGTACA ACATCGGCCA GCCGCTGATC TACCCGCAGA ACAACCTGTC CTACACCGGC AACTTCATGC GCATGATGTT CGCCACGCCG TGCGAGGACT ACAAGGTCAA CCCGGTGCTT GAGCGCGCGC TCGACCGCAT CTTCATCCTG CACGCCGACC ACGAGCAGAA CGCCTCGACC TCGACGGTGC GCCTGGCTGG CTCCTCGGGC ACCAACCCGA TCGCCGCCAT TGCAGCCGGC ATCGCCTGCC TGTGGGGCCC GGCGCACGGC GGCGCGAACG AAGCGGCGCT GAACATGCTG GAAGAGATCG GCAGCGTCGA CAAGATCGAT GAGTTCATCA AGCAGGTCAA GGACAAGAAC AGCGGCGTGC GCCTGATGGG CTTCGGCCAC CGCGTGTACA AGAACTACGA TCCGCGCGCC AAGCTGATGC GTGAGACCTG CCATGAAGTG CTGCAGGAAC TCGGCCTGGA GAACGATCGC CTGTTCAAGC TGGCCATGGC GCTCGAGAAG ATCGCGCTGG AAGACGAATA CTTCGTCAGC CGCAAGCTGT ATCCGAACGT CGATTTCTAC TCGGGCATCG TGCAGCGCGC GCTGGGCATC CCGACCTCGA TGTTCACCTG CATCTTCGCG CTGGCCCGCT CGGTGGGCTG GATCGCGCAG TGGGAAGAGA TGATCACCGA TCCGGAATAC AAGATCGGCC GTCCGCGCCA GCTGTTCAAC GGCGCCGCCA CCCGCGCGGT GCCCGAGCTG GGCAAGCGCT GA
|
Protein sequence | MTPSDVKATL SFSDGSPSVE LPIYTGTVGP DVIDIRKLYG QTGKFTYDPG FMSTASCNSK ITYIDGDKGE LLYRGYAIDD LAGKCDFLEI CYLLLKGELP NAKQKDEFNS TVMNHTMVHE QMQFFLRGFR RDAHPMAVLT GLVGAMSAFY PDAANINDSR EREISQIRLI AKLPTLVAMA YKYNIGQPLI YPQNNLSYTG NFMRMMFATP CEDYKVNPVL ERALDRIFIL HADHEQNAST STVRLAGSSG TNPIAAIAAG IACLWGPAHG GANEAALNML EEIGSVDKID EFIKQVKDKN SGVRLMGFGH RVYKNYDPRA KLMRETCHEV LQELGLENDR LFKLAMALEK IALEDEYFVS RKLYPNVDFY SGIVQRALGI PTSMFTCIFA LARSVGWIAQ WEEMITDPEY KIGRPRQLFN GAATRAVPEL GKR
|
| |