Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1990 |
Symbol | leuC |
ID | 1220830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2166716 |
End bp | 2168125 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238384 |
Product | isopropylmalate isomerase large subunit |
Protein accession | NP_520111 |
Protein GI | 17546709 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.508129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.146532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA CGCTCTACGA CAAACTCTGG GACGACCACG TCGTCCACAC CGAAGAGGAC GGCACGACCG TGCTCTACAT CGACCGCCAG CTGCTGCACG AGGTGACCAG CCCGCAGGCG TTCGAGGGCC TGAAGCTGGC CAACCGCCCG GTCTGGCGCA TCAGCGCGAA CCTGGCCGTC TCGGACCACA ACGTGCCGAC CACCGACCGC TCGCACGGCA TCGCCGACCC GGTCTCCAAG CTGCAGGTCG ACACGCTCGA TGCCAACTGC GACAGCTTCG GCATCACGCA ATTCAAGATG ACCGACAAGC GCCAGGGCAT CGTGCACGTG ATCGGGCCGG AGCAGGGCGC GACGTTGCCG GGCATGACGG TGGTCTGCGG CGACTCGCAC ACCAGCACGC ACGGCGCGTT CGGCGCGCTG GCGCACGGCA TCGGCACCTC GGAAGTCGAG CACGTGCTGG CCACGCAGAC GCTGCTCGCC AAGAAGAGCA AGAACATGCT GGTGAAGGTC GAAGGCACGC TGCCGCGCGG CTGCACCGCC AAGGACATCG TGCTCGCCAT CATCGGCAAG ATCGGCACGG CGGGCGGCAC CGGCTACGCG ATGGAGTTCG GTGGCTCGGC CATCCGCGCG CTGTCGATGG AAGGCCGCAT GACGGTGTGC AACATGGCGA TCGAGGCGGG CGCGCGCGCC GGCATGGTCG GCGTGGACGA CATCACGCTC GAGTACATCA AGGGCCGTCC GTTCGCGCCG CAGGGCGTGG AATGGGAGCA GGCCGTGGCC TACTGGCGCT CGCTGCACTC CGATGAGGGT GCCCGCTTCG ACCACGTGGT CGAGCTGCGC GCCGAAGAGA TCCGCCCGCA GGTGAGCTGG GGCACCTCGC CGGAAATGGT GGTCAGCATC GAAGACCGCG TGCCGGATCC GGACAAGGAA AAGGACCCGG TCAAGCGCAA TGCCATGGAG CGCGCGCTCG AGTACATGGC CCTGCAGCCC AACGTCGCCA TCGGCGACAT CCGCATCGAC AAGGTCTTCA TCGGCTCGTG CACCAACAGC CGCATCGAGG ACATGCGCGC CGCCGCCTGG GTGGTGCAGA AGCTCGGCAA GCGCATTGCC TCCAACGTGA AGCTGGCCAT GGTGGTGCCG GGTTCGGGCC TGGTCAAGGA GCAGGCCGAG CGCGAAGGGC TGGACAAAAT TTTCAAGGCC GCCGGCTTCG AATGGCGCGA GCCGGGCTGC TCGATGTGCC TGGCGATGAA CGCCGACCGG CTGGAGCCGG GCGAGCGCTG CGCGTCCACG TCCAACCGCA ATTTCGAAGG CCGGCAGGGC GCGGGCGGCC GCACCCACCT GGTGAGCCCG GCGATGGCCG CCGCCGCCGC GCTGGAAGGC CACTTCGTCG ACGTGCGCAA GCTCGGCTGA
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Protein sequence | MAKTLYDKLW DDHVVHTEED GTTVLYIDRQ LLHEVTSPQA FEGLKLANRP VWRISANLAV SDHNVPTTDR SHGIADPVSK LQVDTLDANC DSFGITQFKM TDKRQGIVHV IGPEQGATLP GMTVVCGDSH TSTHGAFGAL AHGIGTSEVE HVLATQTLLA KKSKNMLVKV EGTLPRGCTA KDIVLAIIGK IGTAGGTGYA MEFGGSAIRA LSMEGRMTVC NMAIEAGARA GMVGVDDITL EYIKGRPFAP QGVEWEQAVA YWRSLHSDEG ARFDHVVELR AEEIRPQVSW GTSPEMVVSI EDRVPDPDKE KDPVKRNAME RALEYMALQP NVAIGDIRID KVFIGSCTNS RIEDMRAAAW VVQKLGKRIA SNVKLAMVVP GSGLVKEQAE REGLDKIFKA AGFEWREPGC SMCLAMNADR LEPGERCAST SNRNFEGRQG AGGRTHLVSP AMAAAAALEG HFVDVRKLG
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