| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1981 |
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| Symbol | trpA |
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| ID | 1220821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2155704 |
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| End bp | 2156501 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238375 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | NP_520102 |
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| Protein GI | 17546700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0328382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA TTGCTCAAAC TTTTTCGCAA TTGTCCGCGC AGGGCCGCAA GGGCCTGATT
CCGTTCATCA CGGCGGGCGA CCCGTATCCC GAGTTGACCG TCGACCTGAT GCATGCGCTG
GTCAAGGGCG GCGCCAACGT CATCGAACTG GGCGTGCCGT TTTCCGACCC GATGGCCGAC
GGCCCGGTCA TCCAGCGTGC GTCGGAGCGC GCACTCGCCA AGAAAATCGG CCTGCGCACC
GTGCTGGACT ACGTGCGTGC GTTCCGCGCC ACCGACAAGA CCACGCCCGT GGTGCTGATG
GGCTACGCCA ACCCGATCGA GCGCATGGGC ATCGACGCCT TCGCCAAGGC CGCGTCGGAA
GCCGGCGTGG ACGGCGTGCT GGTGGTGGAC TACCCGCCCG AGGAGTGCGA GGCGTTCGCC
AAGACCATGC GGGCCGCGGG CATCGACCCG ATCTTCCTGC TGGCGCCCAC GTCGACCGAA
GCGCGCATGG CGCAGATCGC CCGCGTGGCG AGCGGCTACA TCTACTACGT CTCGCTCAAG
GGCGTGACGG GTGCGGCGAC GCTCGACCTC GACAGCGTGG CCGCGCGCAT CCCGCAGATC
CGCCAGCACG CGCGGCTGCC GGTGGGGGTC GGCTTCGGCA TCCGCGATGC GGCGACGGCG
CGCGCGATCG GCGGCGTGGC CGATGCGGTG GTGATCGGAT CCCGCATTGT GCAATTGCTG
GAGGAGGCGT CCCGCGAACA AGCGGTACAA TGTCTGACTG ATTTCATCGC GGACATCCGC
CAGGCGCTCG ACGCCTGA
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| Protein sequence | MSRIAQTFSQ LSAQGRKGLI PFITAGDPYP ELTVDLMHAL VKGGANVIEL GVPFSDPMAD
GPVIQRASER ALAKKIGLRT VLDYVRAFRA TDKTTPVVLM GYANPIERMG IDAFAKAASE
AGVDGVLVVD YPPEECEAFA KTMRAAGIDP IFLLAPTSTE ARMAQIARVA SGYIYYVSLK
GVTGAATLDL DSVAARIPQI RQHARLPVGV GFGIRDAATA RAIGGVADAV VIGSRIVQLL
EEASREQAVQ CLTDFIADIR QALDA
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