| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1975 |
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| Symbol | |
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| ID | 1220815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2149355 |
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| End bp | 2150179 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238369 |
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| Product | putative transmembrane permease ABC transporter protein |
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| Protein accession | NP_520096 |
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| Protein GI | 17546694 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0858668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.303514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCCT CCGAAGCCAC CCTCACCGCC CCGGCGCAGC AAGCGTATCC GCAGTCCCTG
CTGCCGCTCA ATTTCAGCAA CTGGCGCTAT GTCTGGCTGC GCAACTTCAT GGTGTGGCGC
AAGCTGGCAA TCCCGTCGAT GGCGGGCAAC CTGGCCGACC CCATGATCTA CCTGTTCGGC
CTGGGCATGG GCCTCGGCTT GCTGGTCGGC CGCCTGGACG GCGTGTCGTA CATCGCCTTT
CTGGCGGCGG GCACGGTGGC CTCGAGCACG ATGATGTCGG CGAGCTTCGA GGCGATGTAT
TCAGCGTTTT CGCGCATGCA CGTGCAGCGC ACCTGGGAGG CCATCCTCTA CGCCCCGCTC
ACCCTCGGCG ACGTGGTGCT CGGCGAGCTG CTGTGGGCAG CCAGCAAGTC GGTGCTGTCG
GGCCTGGCGA TCATGCTGGT GGCCGGCGTG CTGGGCTACG CATCGATGCC GCAGGCGCTG
CTGGCGCTGC CGGTGGTCGT GCTGACCGGC TTCACCTTCG CCTGCCTGGC CATGAACATG
ACGGCGCTGG CGCCCAACTA CGACTTCTTC ATGTTCTACC AGACGCTGGT AATCACGCCG
ATGATGCTGC TCTCGGGCGT GTTCTTCCCG CTGTCGCAGT TGCCGGCGCC GATCCGCGCC
GTCACCAGCC TGCTGCCGCT GCCGCACGCG GTCGAGCTGA TCCGCCCGCT GATGCTCGGC
CGCACGCCGG ACGACATCCT GCTGCACCTG GGCGTGCTCG TGCTCTATAC CGTGGTCGCG
CTGTGGTTGT GCCTGTGGCT GCTGCGCCGT CGCATGCTGA AGTGA
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| Protein sequence | MMPSEATLTA PAQQAYPQSL LPLNFSNWRY VWLRNFMVWR KLAIPSMAGN LADPMIYLFG
LGMGLGLLVG RLDGVSYIAF LAAGTVASST MMSASFEAMY SAFSRMHVQR TWEAILYAPL
TLGDVVLGEL LWAASKSVLS GLAIMLVAGV LGYASMPQAL LALPVVVLTG FTFACLAMNM
TALAPNYDFF MFYQTLVITP MMLLSGVFFP LSQLPAPIRA VTSLLPLPHA VELIRPLMLG
RTPDDILLHL GVLVLYTVVA LWLCLWLLRR RMLK
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