Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1968 |
Symbol | |
ID | 1220808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2145111 |
End bp | 2145908 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238362 |
Product | hypothetical protein |
Protein accession | NP_520089 |
Protein GI | 17546687 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.308793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCCC ATTGGCTGTT GAGCACGCTT GTCGTCACGC TGCTGTTGCC GCCCGGCGGC CCGCTGGTGC TGGCCCTGCT GGCGGGCACG GTGGCTTGGC GCGTGCCGCG CTGGCGCTGC CCCGCGTGCC GGGGGCTCGG TATCGCGCTG ATCGCGGCCT GGGTGGCGGC GACGCCGTGG TGCGGCCGGC TGCTGGCATC GTGGACGCAT CCCGCGCCGC CCTTGCGCCT CGATGCGCTG CAGCCGCAGG GCGAGGGCGC GGTGGTGCTG CTGGGTGGTT CGCGCAAGCT GGCGGCGCGT GAATATGCGG GGCAGGGCGC GACCGCGCTG TCCGGCCCGT CGCTCGAGCG CACGGTCTAC GCGGCGCGGC TGGCGCGCGC GGCCCACCTG CCGGTGCTGG CGACGGGAGG TGCGCCGGAG GGGAATGGCG TGCCCGAGGC CGAGCTGATG CGCCGGCTTG TCGCCGACAT GGGGCAGGAT GCGCGCTGGA TCGAGACACG CTCGGCCACC ACCGAGGAAA ACGCCGCGTT CTCCGCGCCG ATGCTGCGCG CGGCAGGCAT CCGGCGCATC TACCTCGTCA CGCATTACTG GCACATGGCG CGCGCGCGAC GATACTTTGA AGGGCAAGGA TTCACCGTCA CGCCGGCGCC GTGCGGCTGG GGTGGCGAGG TGGAGGAGAG CCCCGCCGGT GGCATACTCT CGCTGCTGCC GCGTACGGAT GGCCTGATGC TGACCCGCTT CGCCTTGCGC GAAGCGCTGG GCCAGTTGTG GTTGTCCATC CGTCAGGGCA TTCGCTGA
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Protein sequence | MHPHWLLSTL VVTLLLPPGG PLVLALLAGT VAWRVPRWRC PACRGLGIAL IAAWVAATPW CGRLLASWTH PAPPLRLDAL QPQGEGAVVL LGGSRKLAAR EYAGQGATAL SGPSLERTVY AARLARAAHL PVLATGGAPE GNGVPEAELM RRLVADMGQD ARWIETRSAT TEENAAFSAP MLRAAGIRRI YLVTHYWHMA RARRYFEGQG FTVTPAPCGW GGEVEESPAG GILSLLPRTD GLMLTRFALR EALGQLWLSI RQGIR
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