Gene RSc1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1968 
Symbol 
ID1220808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2145111 
End bp2145908 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID637238362 
Producthypothetical protein 
Protein accessionNP_520089 
Protein GI17546687 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.308793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCC ATTGGCTGTT GAGCACGCTT GTCGTCACGC TGCTGTTGCC GCCCGGCGGC 
CCGCTGGTGC TGGCCCTGCT GGCGGGCACG GTGGCTTGGC GCGTGCCGCG CTGGCGCTGC
CCCGCGTGCC GGGGGCTCGG TATCGCGCTG ATCGCGGCCT GGGTGGCGGC GACGCCGTGG
TGCGGCCGGC TGCTGGCATC GTGGACGCAT CCCGCGCCGC CCTTGCGCCT CGATGCGCTG
CAGCCGCAGG GCGAGGGCGC GGTGGTGCTG CTGGGTGGTT CGCGCAAGCT GGCGGCGCGT
GAATATGCGG GGCAGGGCGC GACCGCGCTG TCCGGCCCGT CGCTCGAGCG CACGGTCTAC
GCGGCGCGGC TGGCGCGCGC GGCCCACCTG CCGGTGCTGG CGACGGGAGG TGCGCCGGAG
GGGAATGGCG TGCCCGAGGC CGAGCTGATG CGCCGGCTTG TCGCCGACAT GGGGCAGGAT
GCGCGCTGGA TCGAGACACG CTCGGCCACC ACCGAGGAAA ACGCCGCGTT CTCCGCGCCG
ATGCTGCGCG CGGCAGGCAT CCGGCGCATC TACCTCGTCA CGCATTACTG GCACATGGCG
CGCGCGCGAC GATACTTTGA AGGGCAAGGA TTCACCGTCA CGCCGGCGCC GTGCGGCTGG
GGTGGCGAGG TGGAGGAGAG CCCCGCCGGT GGCATACTCT CGCTGCTGCC GCGTACGGAT
GGCCTGATGC TGACCCGCTT CGCCTTGCGC GAAGCGCTGG GCCAGTTGTG GTTGTCCATC
CGTCAGGGCA TTCGCTGA
 
Protein sequence
MHPHWLLSTL VVTLLLPPGG PLVLALLAGT VAWRVPRWRC PACRGLGIAL IAAWVAATPW 
CGRLLASWTH PAPPLRLDAL QPQGEGAVVL LGGSRKLAAR EYAGQGATAL SGPSLERTVY
AARLARAAHL PVLATGGAPE GNGVPEAELM RRLVADMGQD ARWIETRSAT TEENAAFSAP
MLRAAGIRRI YLVTHYWHMA RARRYFEGQG FTVTPAPCGW GGEVEESPAG GILSLLPRTD
GLMLTRFALR EALGQLWLSI RQGIR