| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1965 |
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| Symbol | exbD1 |
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| ID | 1220805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2143589 |
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| End bp | 2144002 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238359 |
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| Product | biopolymer transport transmembrane protein |
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| Protein accession | NP_520086 |
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| Protein GI | 17546684 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.393052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTCG GAACCTTCGA CAACGATGAC GAGGTGATGA GCGAGATCAA CATGACGCCG
CTGGTGGACG TCATGCTGGT GCTGCTGATC ATCTTCATCA TCACCATCCC GGTGATCAAC
CACGCCGTGA AGATCGACCT GCCGCGCGCG ACCAACAAGC CCGACGACGC CAAGCCGCAG
AGCGTCAATG TCGAGATCGA CGCCAAGGGC CTGGTGTACT GGAACAACCA GCCGGTCGAC
GATGCCACGC TGGAGGCCGA CATCGTGCAG GCCGCACGGC AACAGCCCCA GCCCGAGATG
CATCTGCGCG CGGATCGCAG CGTCCGCTAC GAGCGCGTCG CCCAGGTGAT GGCCGCCATC
CAGCGCGGCG GCCTGGCGCG CATCGGCTTC GTGACCGAAC CGATGCACAA CTGA
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| Protein sequence | MAFGTFDNDD EVMSEINMTP LVDVMLVLLI IFIITIPVIN HAVKIDLPRA TNKPDDAKPQ
SVNVEIDAKG LVYWNNQPVD DATLEADIVQ AARQQPQPEM HLRADRSVRY ERVAQVMAAI
QRGGLARIGF VTEPMHN
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