| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1960 |
|---|
| Symbol | |
|---|
| ID | 1220800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2138836 |
|---|
| End bp | 2139192 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637238354 |
|---|
| Product | putative transcriptional regulatory DNA-binding transcription regulator protein |
|---|
| Protein accession | NP_520081 |
|---|
| Protein GI | 17546679 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.234312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACC ATGACGCTTC GCTCGATCTG ACGTTCCAGG CGCTCGCCGA TGCGACCCGG
CGATCGATGC TCGCGCAGCT GACCCGGGGC CCTGCCTCGG TGAGCGAGCT CGCACGGCCG
CTGGGGATGT CGCTGCCGGC CGTGATGCAG CACCTGGCGG TGCTGGAGCA TTCGGGTCTC
GTGCGCTCCG AGAAGACCGG CCGCGTGCGG ACCTGCCGGA TCGAACCGCA GGCGCTGAGC
CTGGCGGAGC AATGGATCAA CCAGCGGCGC ATCGAGTGGG AACACCACTT CGACCGGCTC
GGCGCCTACC TGGCAACCCT CGGACAGGAA GGAGCAGCTC ATGACGACGG CGAATGA
|
|---|
| Protein sequence | MLNHDASLDL TFQALADATR RSMLAQLTRG PASVSELARP LGMSLPAVMQ HLAVLEHSGL
VRSEKTGRVR TCRIEPQALS LAEQWINQRR IEWEHHFDRL GAYLATLGQE GAAHDDGE
|
|---|
| |