Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1942 |
Symbol | |
ID | 1220782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2115640 |
End bp | 2117880 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637238336 |
Product | hypothetical protein |
Protein accession | NP_520063 |
Protein GI | 17546661 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.382764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCCA CCAAGTTCAA GCACTTCGAG CCCAAGGTCG ATTCGATCAA AGAGGTGCCG CTGAAATATG AGTCCACCCC GATTCAGGTT GAACTCGGCT GCCCCATCGA TGGCCCCGAG TTGGAGGGCA AGCCCTTGGG GCGCCAGATC AATGCGCTGC CATGCATGAC GATCTTCGTA CATGGCGTCA ACAGTGAGGG CGAGTGGTAT AGCGCTGCGG AACAGCATCT CTGTGCGGGC CTCAATGACC GGCTGGGTCG GTGGGGAACT CAGGCCGAGC TGAAACCTTC GGTTTCCGAA AAAGACCCGA ACTACACTTA CAGCCCCGAT CGCCCCCTCA AGCGCATCCG CCCCCATTTC GACGGCGTGC AGAACGCCGT CAACAGCCGG TACTTGGTTG CCACGTCCCC TGTGATCTTT TTCTATTGGG GCTTCAAGGC GCGCAAGGGT GACTATGGCC GCCCCAGCGA GCACGATTAT CGCGACGCTC ACCATCCCGA GCTACGCGAC TACCCGGTAG CACTGGACGA GGACGACGCC TGGGGCGGCG GCCCTTTTCA GAACGGCACT TCGGGGCTGT GGCACATGTT CCGCAAGAAC AAGGGCTTCA CGCTGGACTT CCAGCGCTTC AATCCCATTA CCGACCGCTA TCTGACCGAG TGCCCGCCGC GCACCTACTA TGTGCACGCC GCCCGCCGAC TGGCCCATCT GATTGCCACC GTTCGCCGCA ACAGCCCGCA TGAGACCATC AACATCGTCA GCCACAGCCA GGGCACCATG GTGTCGATGC TGGCGACCCT GATGCTCAAG GAACAAGGCG TGCGCGGCCC GGAAGGGCTG TTCGTATGCA ACAGCCCCTT CAGCCTGAAC GAACCCGGTG GCCTGATGGA GTGTGCACAG TTCGGCAACG ACTATGTGGT CACCCAGGCG GCGCGCTTCG CTACCCTCAA GGCCGTGGCC GATGTGGTCA AGGAGGCAGG TGAGCACGCC GACGCCATGA CCGATGATGA GTTGGAAAAG ATGTGTCACT CCATCCCCGC GCGCAAGCCG CTGCTGGCCC GCGAGGAATA CGGCAAGTTC TACGTCTACG CCAACCCGCA CGACCGGGTG ATGGGTGCCA GCGTATTGCG CTCGATCGGT TGGCGAGGCT TGACGCAGGC CGAGCAGAGC CGCGTGGCTG CCGCCAATCT ACGGGTGCGG ATGTTTGCGG AGAACATCGA AGCGGGTAAA GGCGGATACC ACTACGCCGC GTGCCCCAAG AGCTTCGCCA TCACCAAGGA CGACGATGGC AAAGAGATTC ACATGGAGCG CACCGAGTTC TGGATTCCGA AGTCCGAAAA GATCGGGGGC GTTTATGGCA TCTACTCGCC CCCGGAGAAG GTGGAGGAAG CCGTCTACAT CAACGCGCCC ACCGTGCCGT GGCTCGCAGA TCAGGTATTG CGGCAACACA TGGAGCAGAC TAAGAATGCG GAGGGGGACC CGGTTTGGAA GAATTTGGCT AATTGGGACG GGCGCCTCAA AGACTTCCAC GAGTACCGTG GTTATCTGCA TCCCACAGAA AATGGCGGTG ACGCTCGCGA TGTAGCCGCC TACGGCCAAG TCTACGGCCC CAATTACGAA GTGGAGCGCA TGGAGGTCGA TGTTTACGGG AAGCGCTACC CGGTCTACAA GACGATCGCC AAAGCACAGC AGGATTTGGT CAAGACCGCA CACAACCTGA CCAATCACAG CACATTGCCG AGCAACGAAT TCGTGGTGCG CGGCGCGATG GCGTGGGACC TGGCGCTAGG CCTGAACCAG AGCTACACCG ATAGGGCCTA CTGGGCCTAT CTCAAGACGC TGGCGGACTG GAAATACAGC GACCCATACT TCATGGAAAA CGACGAGGGC CACCAGCCCG AACCGGGAGA ACCGCCCCCT GGGGTGGACT GCACGCTGGC CTACCCGCAG CGGGATCCGT CCATCGCTTC AGCAAGCGAA CCGGTTGTCA CCGGCTACAC CTGCCCGCAA ACGGGTTGGT GGCAGTGCAA CGAAGCGGGC GCCATCGCCA GCGAGCGGCG ACAGTTCATC CGCGAGGGCC AGATCATGCC CAAGGTGGCG GTAGCGGGCG AACCGTCGCT GTGGCAGCGC GTCAAGGGTG AGCGGCCCGT CTGGAACACG GCCACCGTGT GGATGCTGGC GAGCGACACG TCCGCGCCGC ATGCTGCGCA AGCGGGTGCC GCTCAACCAG CCTCTTCCTG A
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Protein sequence | MRATKFKHFE PKVDSIKEVP LKYESTPIQV ELGCPIDGPE LEGKPLGRQI NALPCMTIFV HGVNSEGEWY SAAEQHLCAG LNDRLGRWGT QAELKPSVSE KDPNYTYSPD RPLKRIRPHF DGVQNAVNSR YLVATSPVIF FYWGFKARKG DYGRPSEHDY RDAHHPELRD YPVALDEDDA WGGGPFQNGT SGLWHMFRKN KGFTLDFQRF NPITDRYLTE CPPRTYYVHA ARRLAHLIAT VRRNSPHETI NIVSHSQGTM VSMLATLMLK EQGVRGPEGL FVCNSPFSLN EPGGLMECAQ FGNDYVVTQA ARFATLKAVA DVVKEAGEHA DAMTDDELEK MCHSIPARKP LLAREEYGKF YVYANPHDRV MGASVLRSIG WRGLTQAEQS RVAAANLRVR MFAENIEAGK GGYHYAACPK SFAITKDDDG KEIHMERTEF WIPKSEKIGG VYGIYSPPEK VEEAVYINAP TVPWLADQVL RQHMEQTKNA EGDPVWKNLA NWDGRLKDFH EYRGYLHPTE NGGDARDVAA YGQVYGPNYE VERMEVDVYG KRYPVYKTIA KAQQDLVKTA HNLTNHSTLP SNEFVVRGAM AWDLALGLNQ SYTDRAYWAY LKTLADWKYS DPYFMENDEG HQPEPGEPPP GVDCTLAYPQ RDPSIASASE PVVTGYTCPQ TGWWQCNEAG AIASERRQFI REGQIMPKVA VAGEPSLWQR VKGERPVWNT ATVWMLASDT SAPHAAQAGA AQPASS
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