| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1941 |
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| Symbol | |
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| ID | 1220781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2114488 |
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| End bp | 2115573 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238335 |
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| Product | bacteriophage protein |
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| Protein accession | NP_520062 |
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| Protein GI | 17546660 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.300905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCA ACAAGACCCG CCGCGCCGCG CGCACGGCAT CCGCCCACGT GCGCACCGCC
AACACCGACG CACCGACCGA GCGCCACACC GACCGGGCCG CGCAGGCCGA GGTGTTCTCT
TTCGGCGATC CGGTCGAAGT GTTGGACCGG CGCGAGCTGC TGGATTACGT CGAGTGCATG
CGCATGGGCC AGTGGTATGA ACCGCCGCTG CCGTGGGACG GCCTGGCGCG CTCGTTCCGC
GCCGCCGCAC ACCACAGCTC GGCCATCTAC GTGAAGCGCA ATATCCTGGT CAGCACGTTC
ATCCCGCACC GCCTACTCTC GCGCGCGACG TTCGAGCGCC TGGTGCTCGA CTGGCAGGTA
TTCGGCAATG CCTACCTGGA GCGCCGCGAC AACGTGCTCG GCCGCCCGAT GCGGCTGGAT
ACGCCCCTGG CCAAGTACGT GCGGCGCGGG CTCGACCTGA ACACCTATTT TTTCGTGCAG
AACTGGCAGC AGCCATACAC CTTCGCCGCC GGCTCCATGT TCCACCTCCA GGAACCGGAC
ATCAATCAAG AGGTGTACGG CCTGCCGGAA TACCTGTCCG CGCTGAACGC CACATGGTTG
AACGAATCGG CCACGCTGTT CCGCCGCCGG TACTACAAAA ATGGCTCCCA CGCCGGCTTC
ATCCTCTACA TGACCGACGC GGCGCAGAGG CAAGAGGATG TCGACACGCT GCGCGAGGCG
ATGAAGAGTG CCAAGGGGCC GGGCAATTTC CGCAACCTGT TCATGTACGC GCCTAACGGC
AAGAAGGACG GGATCCAGCT GCTACCGGTG TCCGAGGTGG CCGCGAAGGA CGAGTTCTGG
AACATCAAAA ACGTCACGCG CGACGACCAG CTCGCCGCGC ACCGCGTGCC GCCGCAGCTC
ATGGGCATCA TCCCGAACAA CACCGGCGGA TTCGGCGACG TGGAGAAGGC CGCCCTGGTG
TTCGCGCGCA ACGAGGTGAA GCCATTGCAG GACCGCCTGT TGGCGGTCAA TGACTGGATC
GGGGAGGAGG TGGTGCGGTT CGCGCCATAT GCACTGGGTG CAGCCGGCCA AGCGGATGCG
CCATAG
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| Protein sequence | MSRNKTRRAA RTASAHVRTA NTDAPTERHT DRAAQAEVFS FGDPVEVLDR RELLDYVECM
RMGQWYEPPL PWDGLARSFR AAAHHSSAIY VKRNILVSTF IPHRLLSRAT FERLVLDWQV
FGNAYLERRD NVLGRPMRLD TPLAKYVRRG LDLNTYFFVQ NWQQPYTFAA GSMFHLQEPD
INQEVYGLPE YLSALNATWL NESATLFRRR YYKNGSHAGF ILYMTDAAQR QEDVDTLREA
MKSAKGPGNF RNLFMYAPNG KKDGIQLLPV SEVAAKDEFW NIKNVTRDDQ LAAHRVPPQL
MGIIPNNTGG FGDVEKAALV FARNEVKPLQ DRLLAVNDWI GEEVVRFAPY ALGAAGQADA
P
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