Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1938 |
Symbol | |
ID | 1220778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2111730 |
End bp | 2112569 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637238332 |
Product | bacteriophage protein |
Protein accession | NP_520059 |
Protein GI | 17546657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.168688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGG GCACCAAGTT CTACCGCGTC GCCACCGAAG GCGCAACGAG CGACGGTCGC GTGATCGACC GCGAAACGCT GGTCGAGATT GCAACCAACT ATGACCCCAA GGTCTACACC GCGCGCGTCA ACCTGGAGCA CATCCGAGGC TACGACCCGA CCGGCCCGTT CAAGGCCTAC GGCGACGTGA CCGCACTGAA GACCGAGGAG GAGGGCGGCA AGCTCGGCCT GTATGCGCAG ATCGACCCCA CGGACGATCT GGTTGCCATG ACCAAGGCTC GCCAGAAAAT CTTTGCCTCT ATGGAGTTGA ACCCGAGCTT CGCCGACACC GGCGAGGCCT ACCTGGTCGG CCTCGCCGTG ACCGACAACC CGGCAAGCCT GGGATGCGAA GTCCTGCAGT TCAGTGCCAA GGCCAAGACC AACCCGCTCG CCGCACGCAA GCAGAACCCG GACAACCTGT TCACCGAAGC CGTGGAGGTG TCGTTCGACT TCTCGCCCGA GGTGACGAAC TACACGGCAA CGACCGTGCC CACGAACTTC GCCGACAGCA TCAAGCGCCT GTTCTCCAAG CAGCGCCGGT CGGACACCAA CGCGGACGCC CGCTTCGCCG ACATGCAGGA GGCCGTGCAG ACGGTCGCCC AGCAGGTGCA GGCCACCGGC GAACAGTTCA GTACCGCGCT CAAGGCCGTC ACCGACCAGC TGAGCGCCAT GAACAGCCAA GGCGCGGAGC GCGACAAGCA GTTCAACGCC ATGAAGGCCC AGCTGGAGAA GACCGACGCC TACGCCGCCC GCCCGCCGGC CACGGGCGGC GCCGGCGCAC CCATCACGAC CGATTGCTGA
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Protein sequence | MAKGTKFYRV ATEGATSDGR VIDRETLVEI ATNYDPKVYT ARVNLEHIRG YDPTGPFKAY GDVTALKTEE EGGKLGLYAQ IDPTDDLVAM TKARQKIFAS MELNPSFADT GEAYLVGLAV TDNPASLGCE VLQFSAKAKT NPLAARKQNP DNLFTEAVEV SFDFSPEVTN YTATTVPTNF ADSIKRLFSK QRRSDTNADA RFADMQEAVQ TVAQQVQATG EQFSTALKAV TDQLSAMNSQ GAERDKQFNA MKAQLEKTDA YAARPPATGG AGAPITTDC
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