Gene RSc1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1924 
Symbol 
ID1220764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2103783 
End bp2104130 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content72% 
IMG OID637238318 
Productphage baseplate assembly-like protein 
Protein accessionNP_520045 
Protein GI17546643 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.245081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCA TGAACAACAC CACCGGCCGA GCGCTTTCCG ACCTGCCGCA CGTGGCGCAG 
TCGATGCGCG ACATCCTCTC CACGCCGATC GGCTCGCGCG TGATGCGGCG CGACTACGGC
AGCCAGGTCC CCGAGCTGAT CGACCAGCCG CTGAACCCGG CAACCCGCCT GCGCACCATG
TCCGCCGCCG TGTCGGCGCT GGTGCGCTGG GAGCCGCGCA TCCGCATTGC CTCGGTGCGG
TTCTGGATCG ACGCGGACGG CCAGCCCGTG ATCGACATCG AGGCCGACCG CGTGGACGGC
CCGCGCCGTG AAGCGGCAGG CACGCTGTCC GTGCCCCTGC GGAGCTGA
 
Protein sequence
MTGMNNTTGR ALSDLPHVAQ SMRDILSTPI GSRVMRRDYG SQVPELIDQP LNPATRLRTM 
SAAVSALVRW EPRIRIASVR FWIDADGQPV IDIEADRVDG PRREAAGTLS VPLRS