Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1897 |
Symbol | |
ID | 1220737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2085812 |
End bp | 2086027 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637238291 |
Product | hypothetical protein |
Protein accession | NP_520018 |
Protein GI | 17546616 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.088473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.90287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCCA TCAATATCAA GCAAGTCGCC GAGAAGGTTT CCCTCGGCCA ATCTACGATC TATCGCATGA TCACCAAGGG CGAGTTTCCC AAGCCGTTCT CGCTCGGCGG CAACCGTACC GCCTGGCTGG ACGAAGACAT CGACGCCTGG CTTGCCATGA GGGCCGGCAG GCCAATACCA AAGCCGGGCG TCACGCTGCT GAAGCCTCTC GCTTGA
|
Protein sequence | MKAINIKQVA EKVSLGQSTI YRMITKGEFP KPFSLGGNRT AWLDEDIDAW LAMRAGRPIP KPGVTLLKPL A
|
| |