| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1893 |
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| Symbol | |
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| ID | 1220732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2078915 |
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| End bp | 2080516 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238286 |
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| Product | hypothetical protein |
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| Protein accession | NP_520014 |
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| Protein GI | 17546612 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0317418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.65749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTGG GCGGATTGAT TCTGCTGCTG GCCCTGGGTT CGGTGCTGCT GACCATGGCG
AACGCCATGT ATTCCAGTTA TCGCACGCAG CGCGATCTGC TGATCCGGAA TGCGCTGGAA
GCCAACCGCG TCTATGCGGC CAAGCTGGCC GAGTCGACCG ATTTGGCCAT CGGCGTCACG
CGGCAGGAGT TGGCCTATGG CGCGGGCCTC CTGGCCGCGC ACATGGAGGA TCCCGCGCGG
CTGACGGAAG AGGCCGAGCG GTTGCGCCAG CAGATGGGCA GCCTCAACTC GGTCGTCATC
GTGCGCCGCG ACGGCGCGGT CATCGGGGCT TCGCCGGCCA GCCTGCAGCT GAAATCCATG
CGCAGCGACT GGGGCCGCCG GCTGCTCGAT TCCCGCATTC CCGAGATCAG CCGGCCGTTC
CGGGCGCCGA CGGGCCGGCT GCTCATCTTC CTGTCCCATC CCGTGATCGA TGGCCAGGGG
CGCCTGCTGG GCTATGTCGG CGGCACGATC TATCTGAACG AGAAGAACCT CCTCCACACG
ATCTTCGTCC ATCACTACTA TCGCGACGGT TCGTATATCT ATGTCGTCGA TCGCGATGGC
ACGGTCATCT ACCATCCGAA CAGCGGCTAT GTCGGCGATA TGACCGGCGC GAACCCGGCG
GTGGCCGAAG TGATGCTGGG ACATGCGGGG GCGCAGCGCA TCCGGAGCCT GCACGGGATC
GACATGCTGG CCGGCTATGC GCCGGTGGCG TCGACGGGGT GGGGCATCGT GGCGCAGAAG
CCCACCGAGA CAACGCTGAG CGATCTCAAT GGCCTGATGC TGGTGACCCT GTCGCACAGC
ATTCCGTTGT TCGTGCTGTC CATCGTCTTC ATCTGGTGGT TTGCCAGGTC GATCTCCCGC
CCGCTCGTCG AGCTGGCCAG CCAGGCCCGG CTGGTGGCGA CGCCGGAGCG CCTGGAGCGG
ATCAAGACCG TGTCTTCCTG GTACATCGAA GCCCATCGTC TCAAGCGCGC GCTGCTGCGC
GGCACGCGCC TGACCAGCAC TCGCATGGCC AGGCTCAACC TCGAGGCGCT CACCGATCCC
CTGACCGGCC TGTACAACCG CCGCGGCGTC GCGAATGCGC TGCGCCTGCA CGCGGGGCGG
CACCAGCCGT TTTCGGCCGT CACGCTGGAC GTCGATCACT TCAAGCGGAT CAACGACCGG
CACGGGCACG ATGTCGGCGA CCAGGTGCTC CGGCACCTTG CCGCGCTGAT CCGGGAGCAG
GCCAGGCATG GCGATATCAC CGGCCGCATC GGTGGGGAGG AGTTCATCCT CCTGCTGCCC
GACGCCACGC CGGACGGTGC CTTCAGGACG GCCGAGCGGC TGCGCCTGGC CGTGGAGGCG
CGGCCGAACC CGGCGGGGCA GGTGGTCACG GTCTCGCTCG GGGTGGCGCA CTATCCGCAG
TCAGCGGGGG AGGTCGATGC CGTCCTGAAA CTGTCCGATC TTGCGCTCTA TCAGGCCAAG
CGCGACGGGC GCAACCGGAC CGTGGTCTAC CAGGCGGAGC GTGCGGACGG GCCCGCCGAC
CTGGAGCCGG CCTCGCGGGC ACGGGCTGAG GAGGGCGGCT GA
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| Protein sequence | MGLGGLILLL ALGSVLLTMA NAMYSSYRTQ RDLLIRNALE ANRVYAAKLA ESTDLAIGVT
RQELAYGAGL LAAHMEDPAR LTEEAERLRQ QMGSLNSVVI VRRDGAVIGA SPASLQLKSM
RSDWGRRLLD SRIPEISRPF RAPTGRLLIF LSHPVIDGQG RLLGYVGGTI YLNEKNLLHT
IFVHHYYRDG SYIYVVDRDG TVIYHPNSGY VGDMTGANPA VAEVMLGHAG AQRIRSLHGI
DMLAGYAPVA STGWGIVAQK PTETTLSDLN GLMLVTLSHS IPLFVLSIVF IWWFARSISR
PLVELASQAR LVATPERLER IKTVSSWYIE AHRLKRALLR GTRLTSTRMA RLNLEALTDP
LTGLYNRRGV ANALRLHAGR HQPFSAVTLD VDHFKRINDR HGHDVGDQVL RHLAALIREQ
ARHGDITGRI GGEEFILLLP DATPDGAFRT AERLRLAVEA RPNPAGQVVT VSLGVAHYPQ
SAGEVDAVLK LSDLALYQAK RDGRNRTVVY QAERADGPAD LEPASRARAE EGG
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