| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1888 |
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| Symbol | |
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| ID | 1220727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2073392 |
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| End bp | 2073985 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238281 |
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| Product | hypothetical protein |
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| Protein accession | NP_520009 |
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| Protein GI | 17546607 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0113894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.523313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAGC CCCTGCGCGC CCACGGCTTC ACCAACGCAA CCCTGGAATG GAAAGCCTGG
CTGGACGTGG TCGACCTCGA CCGCGCCACG CCCGGGCAAA TCGCCGTGCT GGAAGAGAGC
CACCCGAAGG CCAAGACGTC GGACTACTAC CGCTTTCTGG TGCACCAGCC GGAAATCCTG
CGCCAGCGCT CGGCGGCCTT CAACGCCATC ATGTATGCAC CCGGCGGGCT GTCGCGCGCG
GAGCGCGAAC TGGCCAGCAC CGTGGTCTCG CGCGTTAACG GCTGCGTCTA CTGCGCCGCC
GTCCATGCGC AGCGCTTCGA GCAGCTCGCC AAGCGCAACG ACGTCATCCG GCAGGTCTTC
GAAGACCCGC ACACAGCCGG CACCAATGCG CGCGAACGGG CCATCGCCCG GTTCTCGATC
GACCTCACGC TGCGCCCCGG CGACGTGCGC GCCGAAGACC TGCAGCCGCT CCAGGCCGCC
GGCCTGACCG ATGCCGAGAT CCTCGACCTG ATCCACGCCG TCGCCATCTT CGCGTGGGCG
AACCGGCTGA TGCTGAACCT GGGCGAGCCG GTGTTCCCGG ACGAAGCCGC GTAG
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| Protein sequence | MTEPLRAHGF TNATLEWKAW LDVVDLDRAT PGQIAVLEES HPKAKTSDYY RFLVHQPEIL
RQRSAAFNAI MYAPGGLSRA ERELASTVVS RVNGCVYCAA VHAQRFEQLA KRNDVIRQVF
EDPHTAGTNA RERAIARFSI DLTLRPGDVR AEDLQPLQAA GLTDAEILDL IHAVAIFAWA
NRLMLNLGEP VFPDEAA
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