Gene RSc1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1882 
SymboldppB2 
ID1220721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2065954 
End bp2066940 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID637238275 
Productpeptide ABC transporter transmembrane protein 
Protein accessionNP_520003 
Protein GI17546601 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0184491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCT GGCTGATCCG CCGTATCGGC CAGGCGCTGC TGGTGGTGCT GGTGATGACG 
GTGATCGTCT TCGTCGGCCT GCACGCCATC GGCAACCCGG TCGACATCCT GATCGGCCAG
GACGTGGACC AGGTCGACCG CGCGCGCATC ATCGCCGAGC TGGGCCTGGA CAAGCCGCTG
TGGCAGCAGT ACCTCGCCTT CCTCAACGGC GCGCTGCACG GCAACCTCGG CAAGAGCTTC
GTCTACAACG AACCGGCCAT CCAGCTGATC CTGCAGCGCC TGCCGGCCAC GCTGGAGCTG
GCGTTCGCGG CGCTGATCAT CGCGGTGGCG ATCGGGGTGC CGCTGGGGCT GGTCGCCGGG
CTGTATCCGG GCCACCCGGT GTCGCGGCTG CTGATGACGG GCAGCGTGGT GGGCTTTTCG
CTACCGACCT TCTGGGTCGG GCTGATGCTG ATCATGGCCT TCAGCGTGAG CCTGGGCTGG
CTGCCGGCCA GCGGGCGCGG CGAAACGGCC GGCTTCCTGG GCGTGCAGTG GTCGTGGCTG
ACGGCCGACG GGCTGCGGCA CCTGCTGCTG CCGGCGCTCA ACCTGTCGCT GTTCAAGCTG
TCGCTGGTGC TGCGGCTGAC CTCGGCCGGC GTGCGCGAGG TGCTGCCGCA GGACTTCGTC
AAGTTCGCGC GGGCCAAGGG GCTGTCGCCG CTGCGCGTGG TGCTGGCCCA CGTGCTGCGC
AACACGCTGA TCCCGCTGGT GACGGTGCTG GGGCTGGAGC TTGGCTCGAC CATCGCCTTC
GCGGTGGTGA CGGAGAGCAT CTTCGCGTGG CCCGGCGCGG GCAAGCTGAT CCTGGACAGC
ATCAATACGC TGGACCGCCC GTTGATCGTC TCCTACCTGA TCGTGGTGGT GTGCCTGTTC
GTGTCGCTGA ACCTGATCGT CGATGTCCTG TATCGCCTGC TCGACCCGCG CGTGCGCGCC
GCGGATGGCA TGGAGGCCGC GGCATGA
 
Protein sequence
MTGWLIRRIG QALLVVLVMT VIVFVGLHAI GNPVDILIGQ DVDQVDRARI IAELGLDKPL 
WQQYLAFLNG ALHGNLGKSF VYNEPAIQLI LQRLPATLEL AFAALIIAVA IGVPLGLVAG
LYPGHPVSRL LMTGSVVGFS LPTFWVGLML IMAFSVSLGW LPASGRGETA GFLGVQWSWL
TADGLRHLLL PALNLSLFKL SLVLRLTSAG VREVLPQDFV KFARAKGLSP LRVVLAHVLR
NTLIPLVTVL GLELGSTIAF AVVTESIFAW PGAGKLILDS INTLDRPLIV SYLIVVVCLF
VSLNLIVDVL YRLLDPRVRA ADGMEAAA