Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1882 |
Symbol | dppB2 |
ID | 1220721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2065954 |
End bp | 2066940 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238275 |
Product | peptide ABC transporter transmembrane protein |
Protein accession | NP_520003 |
Protein GI | 17546601 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0184491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCT GGCTGATCCG CCGTATCGGC CAGGCGCTGC TGGTGGTGCT GGTGATGACG GTGATCGTCT TCGTCGGCCT GCACGCCATC GGCAACCCGG TCGACATCCT GATCGGCCAG GACGTGGACC AGGTCGACCG CGCGCGCATC ATCGCCGAGC TGGGCCTGGA CAAGCCGCTG TGGCAGCAGT ACCTCGCCTT CCTCAACGGC GCGCTGCACG GCAACCTCGG CAAGAGCTTC GTCTACAACG AACCGGCCAT CCAGCTGATC CTGCAGCGCC TGCCGGCCAC GCTGGAGCTG GCGTTCGCGG CGCTGATCAT CGCGGTGGCG ATCGGGGTGC CGCTGGGGCT GGTCGCCGGG CTGTATCCGG GCCACCCGGT GTCGCGGCTG CTGATGACGG GCAGCGTGGT GGGCTTTTCG CTACCGACCT TCTGGGTCGG GCTGATGCTG ATCATGGCCT TCAGCGTGAG CCTGGGCTGG CTGCCGGCCA GCGGGCGCGG CGAAACGGCC GGCTTCCTGG GCGTGCAGTG GTCGTGGCTG ACGGCCGACG GGCTGCGGCA CCTGCTGCTG CCGGCGCTCA ACCTGTCGCT GTTCAAGCTG TCGCTGGTGC TGCGGCTGAC CTCGGCCGGC GTGCGCGAGG TGCTGCCGCA GGACTTCGTC AAGTTCGCGC GGGCCAAGGG GCTGTCGCCG CTGCGCGTGG TGCTGGCCCA CGTGCTGCGC AACACGCTGA TCCCGCTGGT GACGGTGCTG GGGCTGGAGC TTGGCTCGAC CATCGCCTTC GCGGTGGTGA CGGAGAGCAT CTTCGCGTGG CCCGGCGCGG GCAAGCTGAT CCTGGACAGC ATCAATACGC TGGACCGCCC GTTGATCGTC TCCTACCTGA TCGTGGTGGT GTGCCTGTTC GTGTCGCTGA ACCTGATCGT CGATGTCCTG TATCGCCTGC TCGACCCGCG CGTGCGCGCC GCGGATGGCA TGGAGGCCGC GGCATGA
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Protein sequence | MTGWLIRRIG QALLVVLVMT VIVFVGLHAI GNPVDILIGQ DVDQVDRARI IAELGLDKPL WQQYLAFLNG ALHGNLGKSF VYNEPAIQLI LQRLPATLEL AFAALIIAVA IGVPLGLVAG LYPGHPVSRL LMTGSVVGFS LPTFWVGLML IMAFSVSLGW LPASGRGETA GFLGVQWSWL TADGLRHLLL PALNLSLFKL SLVLRLTSAG VREVLPQDFV KFARAKGLSP LRVVLAHVLR NTLIPLVTVL GLELGSTIAF AVVTESIFAW PGAGKLILDS INTLDRPLIV SYLIVVVCLF VSLNLIVDVL YRLLDPRVRA ADGMEAAA
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