| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1879 |
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| Symbol | |
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| ID | 1220718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2062166 |
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| End bp | 2063317 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238272 |
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| Product | putative amino acids-binding transmembrane protein |
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| Protein accession | NP_520000 |
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| Protein GI | 17546598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.399388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGC ATAAATCCGT CCTGCGCAAC CGCATCGCTT GCGCACTGTC CATGAGCCTG
GCACTGGTCT GCGGCCAAGT GCTGGCAGAA CCGGGTATCA CCGACACCAA AATCCTGATC
GGCCAGACCG CCGGCTTCAC CGGACCGGCC GGCGAGCAGG TCAAAGAGAT GACGCGCGGC
GCCCAGCTGT ATCTCGACGC GGTGAACCGT GCCGGCGGCG TCTACGGCCG CAGGATCGAA
CTGATCTCGG AAGACGACGG CTTCGATGCC AATGTCTCGA AGCAGCGCGC GCACACGTTG
CTCACCGACA AGCAGGTCTT CGCGCTGTTC CTGTCGCGCG GCACGCCCAA TACCGAGGCC
ATCATGAGCG AGGCGCACGC GGTCGGCGCA CCCATGGTGG CGCCGTCGAC GGGGGCATCG
ATCTTCTTCG ACCGGCCCGA TCCGCTGGTG TTCGTGGTGC GCGCCAAGTA CCAGACCGAG
ATCGCCGAGC TGGTCCACCA TTTCGAGACA CTGGGCCTGA AACGCCTGGC GCTGGTGAAC
GTCAACGACT CGTTCGGCAA GGACACCGAG GCCGGATTCA CGACGGCCAC GCAACATCTG
CCGCCCAGCA CACACCAGAT CGTCACCGTC GACCGGCTGA AGCCGAACAT CGAGACAGCG
ACCGCGGAGA TCGGGAAATT CGCGCCCAAT GCCGTGATCC TGGCCTGCGC GGGCACCACC
GCGCAAGCAC TGGCCGAAGC GCTCACCAAG CACGGCACCG TGTCGCAGAT GGCAACGCTG
TCGAACAATT CGAGCACGGC CTTCGCGCGA TCGCTGGGGA ACATGGCGCG CGGCATGATG
GTAACGCAGG TGATGCCGTC GCCGGTGCGC GCGACCTCGC CGATCGGCCG TGAGCTGACC
GCCAGCGCCA AGGCTGCCGG CGTGATGCCG TCCTACGGCA TGATGGAAGG TTATGCCTCC
GCCAAGCTGC TGGTCGAAGG GCTCAAGCGC GCCGGCAAGG CGCCGACTCG CGCCAGCTTC
GTGGCCGGGC TGGAAGCCGC CGGCACGATC GACCTGGGCG GCCTGGACAT CCGCAACGGC
CGCAACAACC ACAAGGGTTC GAGCTTTGTG GAAATCACGG TGATCGGTCC GCACGGCACG
TTCATCAAAT AA
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| Protein sequence | MTGHKSVLRN RIACALSMSL ALVCGQVLAE PGITDTKILI GQTAGFTGPA GEQVKEMTRG
AQLYLDAVNR AGGVYGRRIE LISEDDGFDA NVSKQRAHTL LTDKQVFALF LSRGTPNTEA
IMSEAHAVGA PMVAPSTGAS IFFDRPDPLV FVVRAKYQTE IAELVHHFET LGLKRLALVN
VNDSFGKDTE AGFTTATQHL PPSTHQIVTV DRLKPNIETA TAEIGKFAPN AVILACAGTT
AQALAEALTK HGTVSQMATL SNNSSTAFAR SLGNMARGMM VTQVMPSPVR ATSPIGRELT
ASAKAAGVMP SYGMMEGYAS AKLLVEGLKR AGKAPTRASF VAGLEAAGTI DLGGLDIRNG
RNNHKGSSFV EITVIGPHGT FIK
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