| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1871 |
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| Symbol | |
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| ID | 1220709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2054819 |
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| End bp | 2056036 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238263 |
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| Product | putative integrase prophage protein |
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| Protein accession | NP_519992 |
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| Protein GI | 17546590 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00740779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCA CCGACACCGC AATCCGCAAC GCTAAGCCTG CCGACAAGCC GATCAAGCTG
TTCGACGGTG GCGGCTTGTT TCTCCACGTC ACGCCCGCTG GCCAGCGCTA CTGGCGGCTG
AAGTATCGGT TCGCGGGCAA GGAGAAGCTG CTGGCCATTG GCGTCTACCC GGAAATTGGC
CTGAAAGAGG CGAGGGACCG GCGTGAGGAA GCCAAACGGC TGCTGGGCGA GGGTGTTGAC
CCGTCAGTCG AGCGCAAGGT GCGGAAGGTG GCGACGGTCG AGCGGGCGGC GAACAGCTTC
GAGGCCGTGG CCCGCGAGTG GCACGCCAAG TACGCGCCGG GCTGGTCCGA GAGCAATGCC
AAGAAGGTGC TGGCTCGCCT GGAGAACGAC GTGTTCCCCT GGCTTGGTGG CCGGCCGATC
GCCGAAGTGA AGGCGCCCGA GCTGCTGGGC GTGGCCCGCC GCGTCGAGTC TCGCGGCGCC
CTGGATACTG CGCACCGCGT GCTGCAAACC TGCGGCCAGA TCTTCCGCTA CGCCGTTGCC
ACCGGCCGGG CAGAGCGTGA TCCCTCGGGC GACCTGCGGG GCGCCTTGCC GCCGGCCAAG
GGGAAGCACT ACGCCGCGCC GACTGATCCC AAGGAGGTGG CAGGGCTGCT GCGCATGTTC
GACGGTTTTA CCGGCACATT CATCGTGAAA TGCGCGCTGC TGCTGGCGCC GATGGTCTTC
GTTCGGCCTG GCGAGTTGCG CGCGGCGGAA TGGGCGGACA TCGATCTGGA TGCGGCCGAA
TGGCGCTTCG TGTCTTCCAA GCGGGATGTG GCTCACATCG TGCCGCTCTC CACCCAGGCC
GTCGCAATCC TGCGTGACCT GCACGCGCTG ACCGGCCACG GACGTTACCT CTTCCCCGGT
GCGCGGGACA AAGCCAAACC CATGTCCGAG GCGGCCATCA ATGCTGCGCT CAAGCGCATG
GGCATCGACA CGCAGAAGGA GTTCACCGGC CATGGCGTGC GCCCGATTGC CCGCACTATC
TTGCGCGAGG TGCTGGGCTT CGAGGCGGAG GTGATCGAGT TGCAGCTTGC GCACCGGAAG
AAAGACCCCA ACGGCGCGGC GTATGACCGG GTGGCGTTCC TGGCCGTGCG CAAGCAGATG
ATGCAGGCTT GGGCGGACTA CCTGGACGAA TTGAAGGCCG GGGCCAAGGT GCTGCCGCTC
AAGGGTTCCG CGGCGTAG
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| Protein sequence | MALTDTAIRN AKPADKPIKL FDGGGLFLHV TPAGQRYWRL KYRFAGKEKL LAIGVYPEIG
LKEARDRREE AKRLLGEGVD PSVERKVRKV ATVERAANSF EAVAREWHAK YAPGWSESNA
KKVLARLEND VFPWLGGRPI AEVKAPELLG VARRVESRGA LDTAHRVLQT CGQIFRYAVA
TGRAERDPSG DLRGALPPAK GKHYAAPTDP KEVAGLLRMF DGFTGTFIVK CALLLAPMVF
VRPGELRAAE WADIDLDAAE WRFVSSKRDV AHIVPLSTQA VAILRDLHAL TGHGRYLFPG
ARDKAKPMSE AAINAALKRM GIDTQKEFTG HGVRPIARTI LREVLGFEAE VIELQLAHRK
KDPNGAAYDR VAFLAVRKQM MQAWADYLDE LKAGAKVLPL KGSAA
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