Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1865 |
Symbol | |
ID | 1220703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2049204 |
End bp | 2051444 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238257 |
Product | hypothetical protein |
Protein accession | NP_519986 |
Protein GI | 17546584 |
COG category | [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.150258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGCTA CCCTCTCTAT CGAACAGCAA TTCGCCGCTG CTATGGTCGA ACATGGTTTG CAGCCCGGCG AGATCGTGGC AGACGGCAAG CTGCACCGCT TCGATGGCCC CGACGAAAAG CGCGGCAAGC GCTCCGCCTG GTATGTGCTG CACGGCGATG GCCTGCCGGC TGGTAGCTTC GGCGACTGGC GCACCGGCTT GTCTGAGACG TGGTGCGCCA AGTCCGATCG CACCATGACC GCCGCCGAGC GCCTGGCGCA CCGACTGCGC ATCGAGCAGG CCAAGGCTGA GGCAGCCGCT GAGCGTGCCA AGGTGGCGGG GGAGGCCGCT GCGAAGTGCG CAGAGCTGTG GAACATCGCG GCGAACGTTG ACGGCGGCCA CGACTACATC GAGCGCAAGG GCATCAAGCC GGCGGGCGCG AAGCAGTTGC GTGATGCTCT GCTTATCCCG CTGCGGGATG CCGGCGGCGA GCTGCGCAGC CTGCAATTCA TCCAGCCAGA CGGCGCCAAG CGGTTCAAGA CGGGCGGCAC GGTGGCGGGC TGCTACTGCG CTCTGGGCGG CAAGCCCGGG CCGGATGCTC CGCTGTTGAT CTGCGAGGGC TGGGCCACGG CGTGCAGCCT GCATGAGGCG ACCAGCTACC CGGTGGCCGC GGCGATGAAC GCCGGCAACC TGCTTGCCGT GGCACAGGCG CTGCGGACCA AACTCCCAGA CGTGCCGATG ATTGTCTGCG CCGACGACGA CATTGAGACG GCGGGCAATC CGGGGTTGAC CAAGGCGCGG GAAGCAGCCC AGGCCATCGG CGCACTGCTG GCGGTACCGG ATTTCGGGCC GGAGCGCCCG GACGGCGCCA CCGACTTCAA TGACCTGGCC GTGGCGTGCG GTCACGGTGC TGTCCTGGAT TGCATTGAGG CCGTTCGGAG CGGAAAAGCC GCCGACGATG GGGCAGACGA AATCACGGTG GCAGAAACCG ACGAGCAGGC CGTCGAGCGT CTGGCTTCCC TGAGCCCGAT GCAATACGAC CGTGTGCGCA AGGCCGAGGC CAAACGCATG GGCGTGCAGT TCGGCACGCT TGACCGGATG GTGAAGGACG CACGCGGCGA GGCAGCGAGC GAGGAGGCGG CTCCGTTCGA GGATGTGGAG CCGTGGCCCG AGCCGGTGGA CGGCGCGGAG CTGCTGAGCG AGATCGCCCG CTCTATCCGG CGCTTCATCA TCTGCGACCC GGAGACCATC GCAGCGACGG CGCTATGGTG CGTCGCATCT TGGCTGGCGG ATTCCGTCAA CGTCTGCCCG ATCTTGCTCA TCAACGCTCC CGAAAAGGCC TGCGGTAAGA CGCAACTGCT GACGGTGACC GGAAAGCTAG TGCCACGGCC AGCTCAGGCG GCGGGCATTT CGCCATCGGT GCTGTTCCGC ATGATCGAGA AGTACAAGCC AACGCTGCTG GTGGACGAGA TTGAAACAGT GCTGACCAAG GAGGCGGAAG ACCTGCGCGG GCTGATGAAC GTCGGCCACA CCCGCGATTC CGCGTTCGTC TGGCGCAGTG TCGCCGTGGG TGATGACTTC GAGCCCAAGC GGTTCAGTGT GTTCGGGTTC AAGGCCGTGG CCGGCATCAA CGCCGACAAG TTGGCCGAGA CGATCACCAG CCGCGCTGTG GTGGCGCAGA TGCGTCGCAA GATGCCGCAC GAGACGGCGG AGCGCCTGCG ACACGCCGAG CCCGATCTGT TCGACACGCT GTGCGCGAAG CTGGCGCGCT GGGCCGACGA CAACGGCGAC GCGATCCGCG TTGCCCGTCC GAACCTGCCT GATGCGCTGG GGGATCGGGA TCAGGACAAC TGGGAGCCGC TGCTCGCCGT AGCCGATCTG GCGGGCGGTA CATGGCCGGA CTACGCACGC GGCGCGGCGC TCAAGCTGTG CAATCGAGGC GGCGAGGCTG CGCAGAGTAC CGGGGCTGAG CTGCTGGCAG ACATTCAGGC CGTGTTCGAC CGAAAGGGGA TGCAGCGCAT CTCCATGGCC GATCTGCTGG CCGCGCTCTG CGAGGACGAC GAAGCGCCCT GGAAGACATG GAATCGAGGC AAGGAGATGA CGACCCGCCA GCTGGGCAAG AAGCTGGGCG AGTACGCCAT CAAGAGCAAG GTCGTGCGGA TTGGCTATGA GGCCCACCCC TTTCAAGGTC TTTCCGCCCG GGCCTTTTTG AGTACGCGGG CAGTGCAGAC ATGGGCTCGG GCGATGCTGC CGTCCACATA G
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Protein sequence | MNATLSIEQQ FAAAMVEHGL QPGEIVADGK LHRFDGPDEK RGKRSAWYVL HGDGLPAGSF GDWRTGLSET WCAKSDRTMT AAERLAHRLR IEQAKAEAAA ERAKVAGEAA AKCAELWNIA ANVDGGHDYI ERKGIKPAGA KQLRDALLIP LRDAGGELRS LQFIQPDGAK RFKTGGTVAG CYCALGGKPG PDAPLLICEG WATACSLHEA TSYPVAAAMN AGNLLAVAQA LRTKLPDVPM IVCADDDIET AGNPGLTKAR EAAQAIGALL AVPDFGPERP DGATDFNDLA VACGHGAVLD CIEAVRSGKA ADDGADEITV AETDEQAVER LASLSPMQYD RVRKAEAKRM GVQFGTLDRM VKDARGEAAS EEAAPFEDVE PWPEPVDGAE LLSEIARSIR RFIICDPETI AATALWCVAS WLADSVNVCP ILLINAPEKA CGKTQLLTVT GKLVPRPAQA AGISPSVLFR MIEKYKPTLL VDEIETVLTK EAEDLRGLMN VGHTRDSAFV WRSVAVGDDF EPKRFSVFGF KAVAGINADK LAETITSRAV VAQMRRKMPH ETAERLRHAE PDLFDTLCAK LARWADDNGD AIRVARPNLP DALGDRDQDN WEPLLAVADL AGGTWPDYAR GAALKLCNRG GEAAQSTGAE LLADIQAVFD RKGMQRISMA DLLAALCEDD EAPWKTWNRG KEMTTRQLGK KLGEYAIKSK VVRIGYEAHP FQGLSARAFL STRAVQTWAR AMLPST
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