| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1860 |
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| Symbol | cyoC2 |
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| ID | 1220698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2044622 |
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| End bp | 2045248 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238252 |
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| Product | transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase protein |
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| Protein accession | NP_519981 |
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| Protein GI | 17546579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.63375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.148603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACACA CCCTTTCCCC GACCCTGGAT CCCACGGCGC CCGAGGCGGC GCACCCGCAC
CCGCATCACG ACACCGGGTT CAACACGACG CTGGGCTTCT GGCTCTACCT GATGAGCGAC
TGCCTGATCT TCGCCGTCCT GTTCGCGACC TTCGGCGTGC TCTCCGGGAG CACGGCGGGC
GGACCCGGCG GCCGGCAACT GTTCGAGCTG CCGTTCGTGT TGGCCGAGAC CATGCTGCTG
CTGGTCAGCA GCTACACGTT CGGCATCGCC CTGCTGAAGC AGGACGCCGA TGCGGCGCCA
CGGATGGTGC GCTGGCTCGG GGTCACGTTC CTGCTCGGGG CGCTCTTCGT CGGGATGGAG
CTGTACGAGT TTTCCCATCT GCTGCATGAG GGGGCGGGCC CTGGCGTCAG CGCCTATCTT
TCCGCCTTCT TCACGCTGGT CGGCACCCAT GGCCTGCACG TCACGGCGGG CTTGCTGTGG
CTGGCCGTGA TGATGCACCA GGTCCGGCAT TTCGGCCTGG ACGGCGTCGT GCGCCGCCGG
CTCGCCTGCC TGAGCCTGTT CTGGCACTTC CTGGACCTGG TCTGGATCTG CGTGTTCACC
TTCGTCTATC TGCGGGAGTT CGCATGA
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| Protein sequence | MTHTLSPTLD PTAPEAAHPH PHHDTGFNTT LGFWLYLMSD CLIFAVLFAT FGVLSGSTAG
GPGGRQLFEL PFVLAETMLL LVSSYTFGIA LLKQDADAAP RMVRWLGVTF LLGALFVGME
LYEFSHLLHE GAGPGVSAYL SAFFTLVGTH GLHVTAGLLW LAVMMHQVRH FGLDGVVRRR
LACLSLFWHF LDLVWICVFT FVYLREFA
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