Gene RSc1859 details

Gene Information

• Locus tag: RSc1859
• Symbol: cyoB2
• ID: 1220697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 2042643
• End bp: 2044619
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637238251
• Product: transmembrane cytochrome O ubiquinol oxidase subunit I
• Protein accession: NP_519980
• Protein GI: 17546578
• COG category: [C] Energy production and conversion
• COG ID: [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
• TIGRFAM ID: [TIGR02843] cytochrome o ubiquinol oxidase, subunit I

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.113858
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTCGGAA AACTCAACCT CAATGCCGTC CCGCTCCATG AGCCGATCAT CATGGGAACG 
CTGGCGGCCG TGCTGGTCCT CGGCGCGGCG CTGATCGGCG CCATCACGTA CTTCGGCAGA 
TGGAAGCCCT TGTGGACGGA GTGGATCTGC TCGGTCGACC ACAAGAAGAT CGGCGTGATG 
TACATCGTGC TGGCGCTGGT GATGCTGCTG CGCGGCTTTG CCGACGCCAT CATGATGCGC 
GTCCAGCAGG CGATCGCCTA CGGCGATGCC GCGGGCTATC TGCCGCCGCA TCACTACGAC 
CAGATCTTCA CCGCCCACGG CGTGATCATG ATCTTCTTCG TCGCCACGCC GCTGGTGCTC 
GGCCTGATGA ACGTGATCGT TCCGCTGCAG ATCGGCGCGC GCGACGTGGC CTTCCCGTTC 
GTCAACTCGC TGAGCTTCTG GCTTTCGGCC ATGGGCGCGG TGCTGGTCAT GCTGTCCATG 
TTCGTCGGCG ATTTCGCGGC CACGGGCTGG GTTGCCTACC CGCCGCTATC GGAGCTCGGG 
TACAGCCCGA CGCCCGGCGT CGACTACTAC ATCTGGTCGC TGCAGATCTC CGGCCTCGGC 
ACGACGCTGA CGGGCATCAA CTTCATCGTC ACGATCCTGC GCATGCGTGC TCCCGGCATG 
AACCTGATGA AGATGCCGGT GTTCACCTGG ACCGCGCTGA TCACCAACAT CCTGATCGTC 
GCCATCTTTC CCGTCCTGAC CGCGACGCTC GCGCTGCTCA CCGCCGACCG CTACCTCGGC 
ATGCACTTCT TCACCAACGA GCTCGGCGGC AACGCGATGA TGTACGTGAA CCTGATCTGG 
GTGTGGGGCC ACCCCGAGGT CTACGTGCTG ATCCTGCCGG CGTTCGGTGC GTTCTCCGAG 
ATCATCGCCA CCTTCTCCCG CAAGCCCCTG TTCGGCTACA AGTCGATGGT GTACGCCACC 
TCCTCGATCG GCGTGCTGTC GTTCTTTGTC TGGCTGCACC ACTTCTTCAC CATGGGATCG 
GGAGCCAACG TCAATGCCTT TTTCGGGATC ATGACGTCGA TCATTTCGAT CCCCACCGGG 
GTCAAGCTGT TCAACTGGCT GTTCACCATG TACCGGGGCC GGATCCGCTT CCATTCGTCG 
ACCCTGTGGA CCATCGGCTT CATGGTCACG TTCGCCGTCG GCGGCATGAC CGGCGTGCTG 
CTGGCCGTTC CGGGCGCCGA CTTCGTGCTG CACAACAGCC TGTTCCTGGT GGCCCACTTC 
CACAACGTCA TCATCGGCGG CGTGCTCTTC GGCTGCCTGG CCGCGATCAG CTTCTGGTTC 
CCGAAGGTGT TCGGCTTCAA GCTCAACGAG TTCTGGGGCA AGGTGTCGTT CTGGTGCTGG 
CTGAGCGGCT TCTTCCTGGC CTTCATGCCG CTCTATGTGC TCGGCTTCAA GGGCATGACC 
CGCCGGATGA ACCACTACGC CAACGTCGAC TGGCATCCGT ACCTGGTGGT GGCGCTGGTC 
GGGGCGTGCG TCATCGGCGC CGGGATCGTG GCCATGCTGA TCCAGCTGGG CATCAGCATC 
CGCGACCGCA AGACGCATCC GGACCTCACC GGCGACCCGT GGGACGGCCG CAGTCTCGAA 
TGGTCGACCG CTTCGCCGGC GCCGTTCTAC AACTTCGCCC ACATTCCGCA CATCACCTCG 
CTCGAGCAGC ACTGGGAAGA CAAGGAAACC CGCCGGGCGT GGCGGCAGCC GGCCCACTAC 
GAAGACATCC ACATGCCGCG CAATACGTCG GCGGGGTTCG TGGTGTCGGC CTTCGGCCTG 
CTGCTGTGCT TCGCGCTGGT CTGGCACATG TGGCCGGTCG CCGTCGCCGG CCTGCTCGGT 
GCGGTGGCCA CCTTCATTCT CCGCAGCTAT GACCGCGATG TGGACTACTA CGTGAGCGCG 
GCGGAAGTCG AGCGGATCGA ACGCGCGCGC TACGCGCAAT TGCAGGACGC GGCCTGA 

 

Protein sequence

MFGKLNLNAV PLHEPIIMGT LAAVLVLGAA LIGAITYFGR WKPLWTEWIC SVDHKKIGVM 
YIVLALVMLL RGFADAIMMR VQQAIAYGDA AGYLPPHHYD QIFTAHGVIM IFFVATPLVL 
GLMNVIVPLQ IGARDVAFPF VNSLSFWLSA MGAVLVMLSM FVGDFAATGW VAYPPLSELG 
YSPTPGVDYY IWSLQISGLG TTLTGINFIV TILRMRAPGM NLMKMPVFTW TALITNILIV 
AIFPVLTATL ALLTADRYLG MHFFTNELGG NAMMYVNLIW VWGHPEVYVL ILPAFGAFSE 
IIATFSRKPL FGYKSMVYAT SSIGVLSFFV WLHHFFTMGS GANVNAFFGI MTSIISIPTG 
VKLFNWLFTM YRGRIRFHSS TLWTIGFMVT FAVGGMTGVL LAVPGADFVL HNSLFLVAHF 
HNVIIGGVLF GCLAAISFWF PKVFGFKLNE FWGKVSFWCW LSGFFLAFMP LYVLGFKGMT 
RRMNHYANVD WHPYLVVALV GACVIGAGIV AMLIQLGISI RDRKTHPDLT GDPWDGRSLE 
WSTASPAPFY NFAHIPHITS LEQHWEDKET RRAWRQPAHY EDIHMPRNTS AGFVVSAFGL 
LLCFALVWHM WPVAVAGLLG AVATFILRSY DRDVDYYVSA AEVERIERAR YAQLQDAA