| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1853 |
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| Symbol | |
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| ID | 1220691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2035646 |
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| End bp | 2036803 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238245 |
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| Product | multidrug resistance transmembrane protein |
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| Protein accession | NP_519974 |
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| Protein GI | 17546572 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.104689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA ACAACCAAAC GGCCGACGCC ACTGCGGCTG CGCCTTCCAA GCAACGCCGC
GCCCGGCTCT TTCTGATCCT GGCTGCTGTG GTGGCCGCAG GCGCCATCGG CGGCACGGCC
TACTGGCAGC TCTATGCCTC GCGCTTCGTC TCCACCGACA ACGCCTATGC CGCCGTCGAA
ATCGCCCAGG TGACGCCCGC CATCGATGGC ACGATCGCCG AAGTGCGTGT CAGCGACACC
CAGGCGGTCA AGAAGGGCGA CGTGCTGGTG GTGATCGACC CGACCGACGC CAAGCTGGCG
CTGGAACAGG CCGAGGCCCA ACTGGGCAGC GCCGTGCGCC GGGTGCGCGG CTACGTCGCC
AACGACAGCA GCCTGGGTGC GCAGATCATC GCCAGAGAGG CGGACGAGAA GCGCGCCGCG
GCCGACCTGT TCTCGGCGCA AGCCGACTTC GAGCGGGCCA AGATCGACCT GCGCCGCCGT
GAGGCGCTGG TAGCCTCCGG CTCGGTCTCG GGCGAGGAAC TGACCAAAGC CCGCAACGCC
CACGCCACGG CGGATGCGGC GCGGGCCGCG CCCGCATCCG CCCAGGCGCG GGCAAATCGC
AATGCCGCCG TGGGTTCGCG GCAGGCCAAC GCGGTGCTGA TCGCCAACGC CACGGAAGAC
ACCAACCCCG AAGTCGCCCT GGCCCGCGCC AAGCGGGATC AGGCCGCGGT CGATCTGGGC
CGCACCGTCA TTCGCGCGCC GGTGGACGGC GTGGTCGCCA AGCGCCAGGT GCAGCTCGGC
CAGCGGGTGA AGTCCGGCAC GGCGCTGCTG TCCATCGTGC CGGTGCAGGA CATGCACGTG
GATGCCAACT TCAAGGAAGT GCAGTTGGAG AACGTGCGAA TCGGCCAGCC CGCCACCGTC
AAGGCTGACA TCTACGGCGG CTCGGCCAGC TACCGCGGCG TGGTGGAAGG CTTCTCCGGT
GGTTCCGGCG CGGCGTTCGC GGCCATTCCC GCCCAGAACG CCACGGGCAA CTGGATCAAG
GTGGTGCAGC GCTTGCCCGT GCGCATCAAG CTCGATGCGG CGGAGCTGGA AAAGCACCCG
CTGAAAGTGG GGCTGTCGAT GGTGGTCACG ATCGACACCA GCGCCTCCGG TAGCCAGGCC
ACCCAGGCCC GTCGGTAA
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| Protein sequence | MSDNNQTADA TAAAPSKQRR ARLFLILAAV VAAGAIGGTA YWQLYASRFV STDNAYAAVE
IAQVTPAIDG TIAEVRVSDT QAVKKGDVLV VIDPTDAKLA LEQAEAQLGS AVRRVRGYVA
NDSSLGAQII AREADEKRAA ADLFSAQADF ERAKIDLRRR EALVASGSVS GEELTKARNA
HATADAARAA PASAQARANR NAAVGSRQAN AVLIANATED TNPEVALARA KRDQAAVDLG
RTVIRAPVDG VVAKRQVQLG QRVKSGTALL SIVPVQDMHV DANFKEVQLE NVRIGQPATV
KADIYGGSAS YRGVVEGFSG GSGAAFAAIP AQNATGNWIK VVQRLPVRIK LDAAELEKHP
LKVGLSMVVT IDTSASGSQA TQARR
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