| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1852 |
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| Symbol | |
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| ID | 1220690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2034095 |
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| End bp | 2035633 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238244 |
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| Product | multidrug resistance transmembrane protein |
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| Protein accession | NP_519973 |
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| Protein GI | 17546571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.119423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCC CGTCTTCAGA CAGCCAGGCG CCCCTGACCG GGGGAATGCT GTGGTTGGCG
GCCATTGTTC TCGCGGCGGC CAACTTCGTC GCCGTGCTGG ACATGACTAT CGCCAACGTC
TCGGTTCCCA ACATCTCCGG CAATCTCGGG GTCTCGACGA GTCAGGGCAC CTGGGTCATC
ACGTCCTACG CCGTGGCCGA AGCCATCCTC GTGCCGCTCA CCGGTTGGCT GGCATCGCGC
TTCGGCACGG TGAGGGTGTT TGCCGTAGCA ATGGGATGTT TCGGCCTGTT CTCGGCCCTG
TGCGGCCTGG CCCTTTCGTT GGGGATGCTG GTGGCAGCGC GCATCTGCCA GGGGCTGGCC
GGCGGGCCGC TGATGCCGCT GTCGCAAACG CTGCTGCTGC GCATTTTTCC GAAGGAGAAG
GCGGGGGCTG CCATCGGCCT GTGGTCGATG ACGACCATCG TGGCCCCGGT GCTTGGCCCC
ATTCTGGGCG GCTACCTATG CGATGAATAC AGCTGGCCCT GGATCTTCTA CATCAACCTG
CCCATCGCTG TGGGCTGCGC CTGGGCGGCG TGGAAGATGC TGGCGCGCTA CGAATCGCCC
ATTGCCCGCA ACCCCATCGA CAAGGTGGGG CTGGCCTTGC TGGTGCTGTG GGTGGGCTCG
TTGCAAATCA TGCTCGACGA GGGCAAGCAA CTGGACTGGT TCGCTTCCTC GACCATCGCC
GGCTTGGCGG TCGTCGCCGC CATCGGCTTC GCGGCCTTCC TGATCTGGGA GCTGCACGCC
GAGCATCCGG CGGTGAACCT GCGGGTGTTT CGGCACCGTG GGTTTTCCGC CAGCGTGCTG
ACTATCAGTC TGGCCTTTGG CGCGTTTTTC GGCGCGAATG TGCTCACGCC GCAATGGTTG
CAGAGCTTCA TGGGCTACAC CGCGCTGGAG GCGGGCAAGA CTACCGCCTG GAGCGGCTTC
TTCGCGCTGT TCGCGGCGCC CATCGCGGCA GGGCTCGGGG GCAAGGTCGA CGCGCGCAAG
CTGGTCTTCG GCGGGGTCAT CTGGCTGGGC ATCATCACCC TGTGGCGCAC CGTCGCCACC
ACCGACATGA CCTACTGGCA GGTGGCCGTG CCGCTGATGG CGATGGGGCT GGGCATTCCC
TTCTTCTTCG TGCCCACCAC GGGCCTGGCG ATGGCCAGCG TGGACGAGGA AGAAATGGCT
TCCGCCGCCG GGCTGATGAA CTTCCTGCGC ACCTTGTCGG GGGCCTTCGC GACCTCGCTC
ATCACCACGC TGTGGGATGA CCGCGCCACG CTCCATCACG CGGAACTGGT CGGCGTGTCC
GACGGCGACG GCAGCGTGCG CACGATGCTG GAGGGGGCGG GCTCCACCTT GGACGCCATC
AACCAGTCCA TCGACCAGCT CCTCACCAGC CAAAGCGTGA TGCTGGCCAC CAACGACATC
ATGGCCTGGG TGGGCGTGGC CTTCGTGCTG GCGGCGAGCG CCATCTGGCT TGCGCCCAAG
CCACGCAGGA CGGTGGCGCC GGGCACCGGG GGGCATTGA
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| Protein sequence | MTTPSSDSQA PLTGGMLWLA AIVLAAANFV AVLDMTIANV SVPNISGNLG VSTSQGTWVI
TSYAVAEAIL VPLTGWLASR FGTVRVFAVA MGCFGLFSAL CGLALSLGML VAARICQGLA
GGPLMPLSQT LLLRIFPKEK AGAAIGLWSM TTIVAPVLGP ILGGYLCDEY SWPWIFYINL
PIAVGCAWAA WKMLARYESP IARNPIDKVG LALLVLWVGS LQIMLDEGKQ LDWFASSTIA
GLAVVAAIGF AAFLIWELHA EHPAVNLRVF RHRGFSASVL TISLAFGAFF GANVLTPQWL
QSFMGYTALE AGKTTAWSGF FALFAAPIAA GLGGKVDARK LVFGGVIWLG IITLWRTVAT
TDMTYWQVAV PLMAMGLGIP FFFVPTTGLA MASVDEEEMA SAAGLMNFLR TLSGAFATSL
ITTLWDDRAT LHHAELVGVS DGDGSVRTML EGAGSTLDAI NQSIDQLLTS QSVMLATNDI
MAWVGVAFVL AASAIWLAPK PRRTVAPGTG GH
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