| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1837 |
|---|
| Symbol | |
|---|
| ID | 1220675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2008548 |
|---|
| End bp | 2009798 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637238229 |
|---|
| Product | putative oxygenase subunit protein |
|---|
| Protein accession | NP_519958 |
|---|
| Protein GI | 17546556 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.272624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.145679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAA TCGCGATTGT GGGCGGTGGC CAGGCCGGCT TGCCGCTGGC CTTTGGGCTG
CTGGACAAAG GCTACGAGGT GACCGTCGTC AGCAACCGGA CACCGGACGA CATCCGCCGC
GGCAAGGTCA TGTCCAGCCA GTGCATGTTC GATCCGGCAT TGCAGATCGA ACGCGAGCTC
GGCATCAACG GTTGGGAGGC GGACTGCCCG CCCGTCGAGG GCATCGGCTT TGCCGTGCCG
CACCCCGAGC AGGCCGGCGC GAAAGCCATC GAATGGAGCG CCCGGCTGGA CCGCCCGGCC
CAGTCGGTGG ACCAGCGCGT CAAGATGCCG GCGTGGCTGG AGCAGGTCCA AGCGCGCGGC
GGCCGCCTGC TGCTCCAGGA CGCGGGCATC GCCGAACTCG AAGCGCTGGC GCAAAGCCAT
GACCTGGTCA TCCTCGCCGC CGGCAAGGGC GAGGTGGTCA AGCTGTTCGA GCGCGACGCC
GCGCGCTCGC CGTTCGACAA GCCGCAGCGC GCCCTGGCGC TGACCTACGT GCACGGGCTG
GAGCCGGCGC CGGATTACTC CCGCGTGGCG TTCAACCTGA TTCCCGGCGT GGGCGAGTAC
TTCGTCTTCC CCGCGCTGAC GCTCAGCGGC CCGTGCGACA TCATGGTGTT CGAAGGCGTT
CCCGGCGGCC CGCTGGATTG CTGGCGCGAC GTGCGCACGC CGCAGGAGCA CCTGGCCGCG
AGCCGGCGCT TCCTGCAAAC CTATCTGCCG TGGGAGGCGG ACCGGGCCCG CAATGTCGAG
CTGACCGACG ACAAGGGCAT TCTGGCCGGT GCGTTCGCGC CGACCGTGCG CAAGCCGGTG
ATGACGCTGC CGTCCGGCCG CCTGGTGTTC GGCCTGGGCG ATGCCGTGGT CACCAACGAC
CCGATCACCG GCCAGGGCGC GAACAACGCG ACCAAGGCAT GCAAGGTCTA TCTCGATGCC
ATCCTGGCCC GCGGCGAGCA GCCCTACACG CGCGACTGGA TGGAAGCGAC GTTCGAGCAG
TTCTGGGACT ACGCCCAATG GGTCGTGCAG TGGACCAACT CGCTGCTGAC CCCGCCCCCG
CCGCACATCC TCGGCCTGCT GGGCACGGCC GAGCAAGCGC CCTCGCTGGC CAGCACGATC
GCGAACGGCT TCAACCACCC GCCGAGCTAC TTCCCGTGGT GGGCCGACGC GCAAGCCTGC
GAGGGCTTCA TCGCGCAGCA CCAGCGCACC CCGGCCACGG CTACGGCCTG A
|
|---|
| Protein sequence | MRRIAIVGGG QAGLPLAFGL LDKGYEVTVV SNRTPDDIRR GKVMSSQCMF DPALQIEREL
GINGWEADCP PVEGIGFAVP HPEQAGAKAI EWSARLDRPA QSVDQRVKMP AWLEQVQARG
GRLLLQDAGI AELEALAQSH DLVILAAGKG EVVKLFERDA ARSPFDKPQR ALALTYVHGL
EPAPDYSRVA FNLIPGVGEY FVFPALTLSG PCDIMVFEGV PGGPLDCWRD VRTPQEHLAA
SRRFLQTYLP WEADRARNVE LTDDKGILAG AFAPTVRKPV MTLPSGRLVF GLGDAVVTND
PITGQGANNA TKACKVYLDA ILARGEQPYT RDWMEATFEQ FWDYAQWVVQ WTNSLLTPPP
PHILGLLGTA EQAPSLASTI ANGFNHPPSY FPWWADAQAC EGFIAQHQRT PATATA
|
|---|
| |