Gene RSc1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1835 
Symbol 
ID1220673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2007158 
End bp2007949 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID637238227 
Producthypothetical protein 
Protein accessionNP_519956 
Protein GI17546554 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.162181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.188486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA CCACCCCAAC GATCCTGCCG GCGCTGGCCG CGGGATTGGC CCGCGGCAAC 
ATCCGCGTCG TCGATCTGAC CCAGACGCTG TCGCCGTCGT TTCCGACCCT GCAGCTGCCG
TCGCAGTTCG GGCAGGTCCA GCCGTTCAAG ATCGAGCGCA TCTCGCACTA TGACGCATCC
GGTCCTGCCT GGTACTGGAA CAACTTCTCA TGCGGCGAGC ACACCGGTAC CCACTTCGAT
GCCCCCGCGC ACTGGATCAC GGGGCGCGAC TACCCGGGCA ACAGCGTGGA CACCATCGCC
CCGGAGAACT TCGTCGCGCC GGCCGTGGTG ATCGATGCCA GCGCGCAGGT GCGCGAGAAC
GAAGACTGGC TGCTGACGGT GGATTTCCTG CAGGCCTGGG AGCAGCGCCA CGGACGCATC
CCTGCGGGCG CCTGGGTGCT GTTCCGCACG GACTGGTCGC TGCGGGTGGG CGATGCGGCG
GCCTTCCTCA ACATCCGGGA AGACGGCGCC CACACGCCGG GGCCGACGCA GGAAGCCGTC
GAATGGCTGA TCGGCGAGCG CAATGTGCAC GGCTTCGGCG TGGAGACCAT CAACACCGAT
GCGGGGCAGT CCTATGCGTG GCCGCTGGCC TATCCCTGCC ACACGCTGAT GCACGGGGCG
AACCGGTACG GCCTGCAATG CCTCAAGAAC CTCGATCAGC TGCCGCCGCG GGGGGCGTTC
ATCCTGGCGG CGCCGCTCAA GATCGAGGGC GGCTCGGGCA GCCCGCTGCG CGTGCTCGCG
CTGGTGGAGT GA
 
Protein sequence
MTSTTPTILP ALAAGLARGN IRVVDLTQTL SPSFPTLQLP SQFGQVQPFK IERISHYDAS 
GPAWYWNNFS CGEHTGTHFD APAHWITGRD YPGNSVDTIA PENFVAPAVV IDASAQVREN
EDWLLTVDFL QAWEQRHGRI PAGAWVLFRT DWSLRVGDAA AFLNIREDGA HTPGPTQEAV
EWLIGERNVH GFGVETINTD AGQSYAWPLA YPCHTLMHGA NRYGLQCLKN LDQLPPRGAF
ILAAPLKIEG GSGSPLRVLA LVE