Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1835 |
Symbol | |
ID | 1220673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2007158 |
End bp | 2007949 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238227 |
Product | hypothetical protein |
Protein accession | NP_519956 |
Protein GI | 17546554 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.162181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.188486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTCCA CCACCCCAAC GATCCTGCCG GCGCTGGCCG CGGGATTGGC CCGCGGCAAC ATCCGCGTCG TCGATCTGAC CCAGACGCTG TCGCCGTCGT TTCCGACCCT GCAGCTGCCG TCGCAGTTCG GGCAGGTCCA GCCGTTCAAG ATCGAGCGCA TCTCGCACTA TGACGCATCC GGTCCTGCCT GGTACTGGAA CAACTTCTCA TGCGGCGAGC ACACCGGTAC CCACTTCGAT GCCCCCGCGC ACTGGATCAC GGGGCGCGAC TACCCGGGCA ACAGCGTGGA CACCATCGCC CCGGAGAACT TCGTCGCGCC GGCCGTGGTG ATCGATGCCA GCGCGCAGGT GCGCGAGAAC GAAGACTGGC TGCTGACGGT GGATTTCCTG CAGGCCTGGG AGCAGCGCCA CGGACGCATC CCTGCGGGCG CCTGGGTGCT GTTCCGCACG GACTGGTCGC TGCGGGTGGG CGATGCGGCG GCCTTCCTCA ACATCCGGGA AGACGGCGCC CACACGCCGG GGCCGACGCA GGAAGCCGTC GAATGGCTGA TCGGCGAGCG CAATGTGCAC GGCTTCGGCG TGGAGACCAT CAACACCGAT GCGGGGCAGT CCTATGCGTG GCCGCTGGCC TATCCCTGCC ACACGCTGAT GCACGGGGCG AACCGGTACG GCCTGCAATG CCTCAAGAAC CTCGATCAGC TGCCGCCGCG GGGGGCGTTC ATCCTGGCGG CGCCGCTCAA GATCGAGGGC GGCTCGGGCA GCCCGCTGCG CGTGCTCGCG CTGGTGGAGT GA
|
Protein sequence | MTSTTPTILP ALAAGLARGN IRVVDLTQTL SPSFPTLQLP SQFGQVQPFK IERISHYDAS GPAWYWNNFS CGEHTGTHFD APAHWITGRD YPGNSVDTIA PENFVAPAVV IDASAQVREN EDWLLTVDFL QAWEQRHGRI PAGAWVLFRT DWSLRVGDAA AFLNIREDGA HTPGPTQEAV EWLIGERNVH GFGVETINTD AGQSYAWPLA YPCHTLMHGA NRYGLQCLKN LDQLPPRGAF ILAAPLKIEG GSGSPLRVLA LVE
|
| |