| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1831 |
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| Symbol | tISRso10a |
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| ID | 1220669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2002390 |
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| End bp | 2002755 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238223 |
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| Product | ISRSO10-transposase ORFA protein |
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| Protein accession | NP_519952 |
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| Protein GI | 17546550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2963] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.099383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGTGT TGACGGGCCC GGAGCGTCGC CGGCGGTGGT CGGTGGAAGA GAAGCTTGCG
ATGGTCCGAG AGAGCTTTGA GCCGGGCAAG ACGGTCTCGA TGGTGGCGCG CCAGCACGGC
GTGAATCCGA ATCAGGTGTT CCAGTGGCGC AAGCTGTACC AAGACGGGAG CCTGTCGGCA
GTGACCGCGG GCGAGGAAGT GGTGCCGGCC TCGGAGCTGG CCGAAGCGCT CAAACAAGTC
CGTGAGCTGC AGCGCATGCT CGGCAAGAAG ACGATGGAGA ACGAGATTCT TCGCGAAGCC
GTGGAATACG GTCGGGCAAA AAAGTGGATA GCGCGCTCGC CATCGTTGCC GGGGGACGAC
CAGTGA
|
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| Protein sequence | MEVLTGPERR RRWSVEEKLA MVRESFEPGK TVSMVARQHG VNPNQVFQWR KLYQDGSLSA
VTAGEEVVPA SELAEALKQV RELQRMLGKK TMENEILREA VEYGRAKKWI ARSPSLPGDD
Q
|
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| |