| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1830 |
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| Symbol | tISRso10b |
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| ID | 1220668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2001545 |
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| End bp | 2002393 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238222 |
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| Product | ISRSO10-transposase ORFB protein |
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| Protein accession | NP_519951 |
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| Protein GI | 17546549 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.189696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGCTAG TTTGCGAGGT CCTCGGCGTA GCGCGCTCAA ACGTGGCGGC CAAGCGGGCC
CGGCCGGGTG ATTGGCGCGA CGGGCGCACA GCTCGGCAAA CCGACGACGC TAGCTTGGTC
GACGAAATCC GGCGCACCAT CGCCGACTTG CCGAGCTATG GCTACCGGCG GGTCTGGGGC
AGATTGCGGC GCGAACGTGA GCGTCAATGC GAAGCGCCGA TCAATGCCAA GCGTGTCTAT
CGGGTCATGC GTGTGCACAG CTTGCTGCTT GAGCGCAGGC CGACGCCACC GCGTCCACCG
CGCCGGCATG ACGGCAAGGT CGCCGTGGCC AAGAGCAACC AGCGCTGGTG CTCCGATGGC
TTCGAGTTCC GCTGCGACAA CGGCGAGCCG CTGCGGGTGA CGTTCGCGCT GGATTGCTGC
GACCGCGAGG CGATGAGCTG GGTGGCGACG ACCGGCGGCT ACAGCGGCGA CGTAGTACGC
GACGTGATGC TGGCGGCCGT CGAGCAGCGC TTCGGCAATG TTCCGAAAGC GCCAGCGGAA
ATTGAATGGC TGACGGACAA CGGCTCAGGC TACATTGCTG GGAAGACTCG CGAGTTCGCC
ACGGACATTG GCTTGAAGCC ATTGACGACA CCGGTTTGCA GCCCGCAGAG CAACGGCATG
GCCGAGAGCT TCGTGAAGAC GATGAAGCGC GACTACGTCG CCTTCATGCC CAAGCCTGAC
GCGGCCACAG CGACGCGCAA CCTCGCCATC GCGTTCGAGC ATTACAACGA GCAGCATCCC
CATAGCGCAC TGAAATATCG CTCGCCACGC GAGTTCAGGC GCAGGACGGA ATCATCAACT
CAAGTGTGA
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| Protein sequence | MKLVCEVLGV ARSNVAAKRA RPGDWRDGRT ARQTDDASLV DEIRRTIADL PSYGYRRVWG
RLRRERERQC EAPINAKRVY RVMRVHSLLL ERRPTPPRPP RRHDGKVAVA KSNQRWCSDG
FEFRCDNGEP LRVTFALDCC DREAMSWVAT TGGYSGDVVR DVMLAAVEQR FGNVPKAPAE
IEWLTDNGSG YIAGKTREFA TDIGLKPLTT PVCSPQSNGM AESFVKTMKR DYVAFMPKPD
AATATRNLAI AFEHYNEQHP HSALKYRSPR EFRRRTESST QV
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