Gene RSc1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1821 
Symbol 
ID1220659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1990210 
End bp1990653 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID637238213 
Producttranscription regulator protein 
Protein accessionNP_519942 
Protein GI17546540 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.676106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAA CCAAGGCGTT TGTCGACGAT TACCTGCCGG CCCTCCTCGG CCGGGCCTGG 
CACCTGGTTT CGACCCAGTT CCACGCGGTG GTCGAGCAGC ACGGGCTGTC GGTGCTGGAG
TGGCGCGTGC TGTCGACCCT GGCAAGCAAC GGCCCCATGA GCATCTCGGT GCTGGCCGAA
AAGGCCGTGA GCAAGCAGCC GACCGTCACG CGGCTGCTGC TGCGCCTGGA GGCGCAAGGC
CATGTGGAGC GCTCCACCAG CCGCGACGAC CGCCGCTACA CCCTGGTCCG GGTCACGCGC
AACGGCCGGC GCCTGGTCTC CGGCCTGATC GCGCTGGCCG AAGAGCATGA GCGCGCGATC
CTGGAGCCCA TGAGCCAGCA GAAAATCGAT ACGCTCAAGG ACATCCTGCA CGAGCTCATC
AGCCGGCACG CCCCCCAGGA CTGA
 
Protein sequence
MTRTKAFVDD YLPALLGRAW HLVSTQFHAV VEQHGLSVLE WRVLSTLASN GPMSISVLAE 
KAVSKQPTVT RLLLRLEAQG HVERSTSRDD RRYTLVRVTR NGRRLVSGLI ALAEEHERAI
LEPMSQQKID TLKDILHELI SRHAPQD