Gene RSc1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1820 
Symbol 
ID1220658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1989576 
End bp1990199 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID637238212 
Producthypothetical protein 
Protein accessionNP_519941 
Protein GI17546539 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCACTG ACGACGTTTT CAGCTACCCG ATACAGGCCG GTCACGGCCT GCCGCATGAC 
CCCATTCCCG CGATTCTCGG GCCGCGGCCG ATCGGCTGGA TTTCCACGCG CGATGCCGAG
GGCCGGCTCA ATCTGGCGCC GTACAGCTTC TTCAATATCT TCAACTACAA GCCGCCGCTG
GTCGCGTTCT CGAGCGTCGG CAAGAAGGAC AGCGTGCGCA ATGCCGAAGC GACCGGCGAG
TTCGTCTACA ACCTCGCGAC GCGCCCGCTG GCGGAGCAGG TCAACCAGAC CAGCATCGAC
GCGCCGCCGG GTATCGACGA GTTCGCGCTG GCCGGCCTGA CGCCCGCGCG CTGCATCGAG
GTGGCCGCGC CGCGCGTGGC GCAGAGCCCG GTCTCGCTCG AGTGCAAGGT GACGCAGGTG
CAGCAGCTGG CCGGCATCGA CGGGGTGGCG CTGAATACGT GGATGGTCTT CGGCGAAGTC
GTCGCGGTGC ACATCGACCG CGCGCTGCTG CGGGACGGCA TCTACGACAC CGCCGCGGCC
CAGCCGATTC TGCGCGCCGG CGGGCCCGCC GACTACTTCG AGGTCTTGCC GCAGGGACGC
TTCAGGATGT ACCGGCCGAG ATAG
 
Protein sequence
MCTDDVFSYP IQAGHGLPHD PIPAILGPRP IGWISTRDAE GRLNLAPYSF FNIFNYKPPL 
VAFSSVGKKD SVRNAEATGE FVYNLATRPL AEQVNQTSID APPGIDEFAL AGLTPARCIE
VAAPRVAQSP VSLECKVTQV QQLAGIDGVA LNTWMVFGEV VAVHIDRALL RDGIYDTAAA
QPILRAGGPA DYFEVLPQGR FRMYRPR