| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1808 |
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| Symbol | |
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| ID | 1220646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1961077 |
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| End bp | 1962933 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238200 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_519929 |
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| Protein GI | 17546527 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.877755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0567743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAG TTGAAATCGC TGAATTGCAG GCCGCCGCGG GCGAGGCGGC GCAGGACGCT
GCCGCCGCGC CGCGCAAGAC CGGCCTGGCG GCGCTGCTGG CGCTGGCCGG CGAGCGCAAG
GGCAGCCTGG TGCTGGCCGC GGCGCTGTCG GCGCTCAGCA GCGTGCTGTC GCTCGCGCCG
CTGCTGGTGA TCTATGCCGT CCTGATGTTG ATCGGGCAGG ACCGGGTGGC GGCCTCGGCG
CTCTGGCCGA TTCTCGGCTG GGGCGCGCTG GCGATCGGGC TGCGCTGGCT GCTGCTGGTG
GCCAGCGGCG TGGTGGCGCA CCTGGCGGCC TTCGACATCC TGCTCGACCT GCGGCTGAAG
GTGGCCGCCA AGCTGACGCG GCTGCCGCTG GGCTGGATCA CGAAGCAGAG CGCGGAGGCG
ACCAACAAGG TGCTGCGCGA AGATGTCGAC CGCCTCGAGC TGTTCATCGC GCACCACCTG
AACGACAGCG CGGCGGCCGT GGCCCTGCCG CTGGCCAGCG CCGTCGCCCT GTTCTGGTTC
GACTGGCGCA TGGCGCTGGT GACCCTGGCC ACGGTGCCGG TGGCGGCGCT CGTGCAGATC
CTGCTCTGGA AGAAGATTCC CGAGGTCATG GCGCAGTACA ACGAGGTCAA CGCCAGCCTG
TCGGCCAGCG TGGTCGAGTA TGTGCAGGGC ATCGCCGTGC TCAAGACCTA TCATCGCGGC
GCGCTGGCCT CGAAGCGGCT GACGCGCGTC ATCGACGCCT ACCGCGCCGT CATCGCGCGC
ATGGTGAGGA TGACGGTGCC GGGGTGGTCG GCCTTTACCG TGGTGATCGG CGCCAACATG
CTGTCGATCC TGCCGTTCGG CGGCTACTGG TATCTGCAGG GCTCGCTGAG CCTCGAACTG
TTCGTCCTGT GCCTGCTGCT CGGCCTGGGC ATCACGCGGC CGCTGTTTGC GCTGGCCTTC
TTCGGCAGCC TGCTGCGCCT GATCCAGGAC AGCCATGGCC GCGTGCAGAA CCTGATGCAG
GCGCCCGAGC TCACGGACGC GCCCGCGGCG GGCAAGCCGG CCGACAGCAC CGTGGCCTTC
GAGGGCGTCG GGTTCGCCTA CGGCGACAAG GATGTGCTGC ACGAAGTCAG CTTCACCGTG
CCGGCCGGCA GCTTCACCGC CATCGTCGGC CCGAGCGGGG CCGGAAAATC CACCCTTGCC
CAGTTGCTGG CACGGTTCTG GGACGTGGGG CGGGGCGCCA TCCGCATCGG CGGCGTCGAT
GTGCGCGCCT TGCCGCTGGG CGACATGCAT CGCCAGGTGG CCTACGTGAT GCAGGACGTC
TTCTTGTTCA ACGACACCGT CCTCGAAAAC ATCCGCCTCG GCCAGCGCGA GCTCGACGAA
GCGCAGGTGA TCGCCGCCGC CAAGGCGGCC CAGGCGCACG ACTTCATCAG CCGCTTGCCG
CAGGGCTATC ACACCGTCCT GGGCGAACGC GGCGCGCGGC TGTCGGGCGG CGAGAAGCAG
CGGCTGTCGA TCGCCCGCGC CCTGGTCAAG GACGCGCCGA TCATCGTGCT GGACGAGGCC
ACGGCCTTCA CCGACCCGAT GAGCGAGGCG CAGATCCTCG ACGCGCTGGG CGTGCTGACG
CAGTCCAAGA CGGTCATCGT GATCGCCCAC CGCCTGTCGA CCATTGCCGA CGCGGACCAG
ATCGTGCTGC TGGACCACGG TCGCGTGGCG GCCGCCGGCA CGCATGCGCA ACTGCTGGCC
GGCAGCGACC TGTACCGCCG GCTATGGCGG ATGCACCGCG ACAGCGCCGA CTGGCGCCTC
CCATCGGCGC ACGCCACGGC GAGCGCAGAC CAACCGCTTG AAGGAGTGTC CCAATGA
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| Protein sequence | MSSVEIAELQ AAAGEAAQDA AAAPRKTGLA ALLALAGERK GSLVLAAALS ALSSVLSLAP
LLVIYAVLML IGQDRVAASA LWPILGWGAL AIGLRWLLLV ASGVVAHLAA FDILLDLRLK
VAAKLTRLPL GWITKQSAEA TNKVLREDVD RLELFIAHHL NDSAAAVALP LASAVALFWF
DWRMALVTLA TVPVAALVQI LLWKKIPEVM AQYNEVNASL SASVVEYVQG IAVLKTYHRG
ALASKRLTRV IDAYRAVIAR MVRMTVPGWS AFTVVIGANM LSILPFGGYW YLQGSLSLEL
FVLCLLLGLG ITRPLFALAF FGSLLRLIQD SHGRVQNLMQ APELTDAPAA GKPADSTVAF
EGVGFAYGDK DVLHEVSFTV PAGSFTAIVG PSGAGKSTLA QLLARFWDVG RGAIRIGGVD
VRALPLGDMH RQVAYVMQDV FLFNDTVLEN IRLGQRELDE AQVIAAAKAA QAHDFISRLP
QGYHTVLGER GARLSGGEKQ RLSIARALVK DAPIIVLDEA TAFTDPMSEA QILDALGVLT
QSKTVIVIAH RLSTIADADQ IVLLDHGRVA AAGTHAQLLA GSDLYRRLWR MHRDSADWRL
PSAHATASAD QPLEGVSQ
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