| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1800 |
|---|
| Symbol | |
|---|
| ID | 1220638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1936388 |
|---|
| End bp | 1937593 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637238192 |
|---|
| Product | GALA protein |
|---|
| Protein accession | NP_519921 |
|---|
| Protein GI | 17546519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0919922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCATTCT TTCCACCGGA GATCTGGACG GAAATCGCGC GCGGCACCAA GCCCGCGGAC
ATGCAAAGCC TGCGCGCCGT CAGCCGGGCG GTGAAGATGG GCGCCGAGGC CAGCATCCCG
CAACTGACCA TCACGCACCG GGACAGCGGC AAAAGGCCGC CGTCCGTGGC CGGTTGCCTG
GAGCTGAATC GGCTGACGCT CGTCGGCCAT TTCACGGATG CCTACCTGCA GAGGTTGCCG
GCTTCCCTCA CGGCGCTGGA CCTGAGCCGA TGCGAGGGCC CGATCACGTC CGCCGGGATC
GCCCGCCTGC TGGCGCTGCC GCTGGAACGG CTGGATGTCA GCGGCTGCGG GCTGGATGCC
GAAAGCGCGC GGCTGCTGGC GAGCCACCCG ACGCTGACCG TGCTCAACAT CTCCCGCAAC
GCGATCGGCG ACGACGGTGC CGCTGCCTTG GCGGCCAACC CGAAGCTGAC CTCGCTCAAT
GTCGGCCGCA ACGGGATCAG TGACGCCGGC GCGCGCGCGT TGGTTGCCTG CGCCGGGCTG
ACCAAGCTCG ATATCAGCGA CAACAGGATC GGCGATGCGG GCGCGCGGGC GCTGGCCGGC
AGCGCCAAGC TGAACAAACT CGATGCCGGC GACTGCGGGA TCGGCCCCGA GGGCGCTCGG
GCACTGGCCG CCAGCCAGAC GCTCACCCGA CTGGACCTGC GCTACAACGA GATCGGGGTC
GGGGGGGCCG AGGCGCTGGC CGCGAATCCC CGGCTCACCA GCCTCAACGT CTGCGGCAAT
GCGCTGGGGA GCGCGGGCGC GGCGCTGCTG GCAGCCAGTG CCGCGCTCAC CGAGCTCGAC
ATCGGCAACA ACGGCATCGG CAACGCGGGG GCGCGGGCCC TCGGCGCCAA TGCCACGCTC
GTCAAGCTGA GTGTCGCCAA CAACGGCATC GAGGAGGCAG GGGCGCGAGC GCTGGCGGCC
AGCACCACGC TCACCGCGCT GGACATCGGC AGCAACCGGA TCGGGGATGC CGGTGCGCAG
GCCCTGGCTG CCAACGATAC GCTCGTCACC CTGGATGCCA GCGCCAACTG GATCGGAGAC
CCGGGCGCGC TGGCGCTGGC CGACAACACC CGGCTGGCCA CGCTCAATGT CGGCGCCAAC
CGGATCGGCG AAGCGGGCAT GCGGGCACTG GAGGCCAGCA CCACGCTGGC CGTGCTCAAG
ACGTGA
|
|---|
| Protein sequence | MPFFPPEIWT EIARGTKPAD MQSLRAVSRA VKMGAEASIP QLTITHRDSG KRPPSVAGCL
ELNRLTLVGH FTDAYLQRLP ASLTALDLSR CEGPITSAGI ARLLALPLER LDVSGCGLDA
ESARLLASHP TLTVLNISRN AIGDDGAAAL AANPKLTSLN VGRNGISDAG ARALVACAGL
TKLDISDNRI GDAGARALAG SAKLNKLDAG DCGIGPEGAR ALAASQTLTR LDLRYNEIGV
GGAEALAANP RLTSLNVCGN ALGSAGAALL AASAALTELD IGNNGIGNAG ARALGANATL
VKLSVANNGI EEAGARALAA STTLTALDIG SNRIGDAGAQ ALAANDTLVT LDASANWIGD
PGALALADNT RLATLNVGAN RIGEAGMRAL EASTTLAVLK T
|
|---|
| |