Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1797 |
Symbol | |
ID | 1220635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1932832 |
End bp | 1933923 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637238189 |
Product | pyruvate dehydrogenase E1 component alpha subunit oxidoreductase protein |
Protein accession | NP_519918 |
Protein GI | 17546516 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0478854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG TCGGCAGCTT TCAGATCGAC TACACGCAGT ACCTTGACCC CGAGGGCCAG CCGGTCCAGC CATTGCCGGC GTTTGCGCAA GACGTGCCGA CCCTGCTCGC GCTGTATCGC GCCATGGTGC TGACGCGCGC GTTCGACACC AAGGCCATCG CGCTGCAGCG CACCGGCAAG CTCGGCACCT TTGCCTCGTC GGTCGGCCAG GAGGCGATCG GCGTGGGCGT GGCCAGCGCC ATGCGGGCCG AAGACGTCCT GTTCCCGTCC TACCGCGACC ACAGCGCGCA GTTGCTGCGC GGCGTCAGCA TGGCCGAGAG CCTGCTGTAC TGGGGCGGCG ACGAGCGCGG CAGCTGCTTT GCTGCGGTGC GCGAAGATTT CCCGAACTGC GTGCCGATCG GCACCCAGGT CTGCCACGCG GCGGGGGCCG CCTACGCGTT CCAGCTGCGC CGCGAGCCGC GTGTCGCCGT CGCGGTGTTC GGTGACGGCG GCACCTCCAA GGGCGATTTC TATGAAGGGA TGAACCTGGC CGGCGTGTGG GGCGCGCCGC TGGTGCTCAT CGTCAACAAC AACCAGTGGG CGATCTCGGT GCCGCGCAGC CGCCAGACCG CCGCGCAGAC CCTGGCCCAG AAGGCGATCG CCGCGGGTAT CGCCGGGCGG CAGGTGGACG GCAACGACGT GATCGCCGTG CGGCAGGCCG CGCAGGACGC CCTCGACAAG GCCCGCTCGG GCGGCGGCCC GACGCTGATC GAAGCGCTCA GCTACCGGCT GGGCGACCAC ACCACGGCGG ACGACGCCAC GCGCTACCGC GATCCGGACA GCGTCAAGCA GGCCTGGGCC CGCGAGCCGA TCCTGCGCTT GCGCAACTAC CTGATGCGCC TGAGTGCCTG GGACAAGGCC CAGGAAGAGC AGCTCGGCCG CGCCTGCTAT GCCCAGGTGG AGGAGGCGGT GGCGGCGTAC CTGGCGGTCG GGCAGCCCGG CCCCTCGGCG ATGTTCGACC ACCTGTATGC CGCCTTGCCG CGCGCGCTGG AGGCGCAGCG CGCCATGGCG CTGGCCTTTG CGCCGCAGGG CGGGGAGGGC GGCCATGGCT GA
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Protein sequence | MSTVGSFQID YTQYLDPEGQ PVQPLPAFAQ DVPTLLALYR AMVLTRAFDT KAIALQRTGK LGTFASSVGQ EAIGVGVASA MRAEDVLFPS YRDHSAQLLR GVSMAESLLY WGGDERGSCF AAVREDFPNC VPIGTQVCHA AGAAYAFQLR REPRVAVAVF GDGGTSKGDF YEGMNLAGVW GAPLVLIVNN NQWAISVPRS RQTAAQTLAQ KAIAAGIAGR QVDGNDVIAV RQAAQDALDK ARSGGGPTLI EALSYRLGDH TTADDATRYR DPDSVKQAWA REPILRLRNY LMRLSAWDKA QEEQLGRACY AQVEEAVAAY LAVGQPGPSA MFDHLYAALP RALEAQRAMA LAFAPQGGEG GHG
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