| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1791 |
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| Symbol | |
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| ID | 1220629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1926420 |
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| End bp | 1927451 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238183 |
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| Product | solute-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_519912 |
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| Protein GI | 17546510 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.450613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0698003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC TGATCCATTG GCTGCGCGCA TGCGGCCTCG TTGCCGCCGG CGCCTTGGCC
ATGGCGGCGC CGCTGCATGC CCAACCCGCG GGCCAGCAGG TCGCCATCTG CTACAACTGC
CCGCCGGAAT GGGCCGACTG GGCCGGCCAG ATCCAGGCCA TCAAGAACCG GACCGGCATC
GCCGTGCCGT TCGACAACAA GAACTCCGGC CAGGCCATCG CGCAGATGCT GGCCGAGAAG
GGGCACCCGG TGGCCGACGT GGCCTACCTG GGCATCACCT CGGCCTACCA GGCCAAGGAG
AAGGGCCTGG TCGCCGGCTA CAAGCCCAAG CACTGGGACG ACATCCCGGC CGGCATGAAG
GACCCGGATG GCGCGTTCTT CTCGATCCAC TCCGGCACGC TGGGCTTCTT CGTCAACAAG
GACGCGCTGG AAGGCAAGCC TGTGCCGCGC TCGTGGAAGG ACCTGCTCAA GCCCGAGTAC
AAGGGCATGG TCGGCTACCT CGACCCGAGC AGCGCCTTCG TCGGCTATGT CGGCGCCGTG
GCGGTCAACC AGGCGCTGGG CGGCACGCTC GACAACTTCG GCCCGGGCAT CGACTGGTTC
AAGCAGCTCA AGAAGAACGC GCCGATCGTG CCCAAGCAGA CCGCCTACGC GCGCGTGGTG
GCCGGCGAGA TCCCGATCCT GCTCGACTAC GACTTCAACG CCTACCGCGC CAAGTACAAG
GACCACGCCA ACGTGGAGTT CGTGATCCCG CAGGAGGGCT CGATCGCGGT GCCGTACGTG
ATGAGCCTGG TGGCCGGCGC GCCGCATGCG GACAATGCGA AGAAGGTGCT CGACTTCGTG
CTCTCCGATG AAGGCCAGGC GCTGTGGGCC AACGCCTACC TGCGCCCGGT GCGCGCCGGC
GCGATGTCGA AGGAGGCCGC CGCGCGCTTC CTGCCGGCCA GCGAGTACGC CCGCGTGAAG
ACGGTCGACT TCAACCAGAT GGCGGCGCGC CAGCAGGCCT TCGGCACGCG CTACCTGGAC
GAGGTGCGCT GA
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| Protein sequence | MKRLIHWLRA CGLVAAGALA MAAPLHAQPA GQQVAICYNC PPEWADWAGQ IQAIKNRTGI
AVPFDNKNSG QAIAQMLAEK GHPVADVAYL GITSAYQAKE KGLVAGYKPK HWDDIPAGMK
DPDGAFFSIH SGTLGFFVNK DALEGKPVPR SWKDLLKPEY KGMVGYLDPS SAFVGYVGAV
AVNQALGGTL DNFGPGIDWF KQLKKNAPIV PKQTAYARVV AGEIPILLDY DFNAYRAKYK
DHANVEFVIP QEGSIAVPYV MSLVAGAPHA DNAKKVLDFV LSDEGQALWA NAYLRPVRAG
AMSKEAAARF LPASEYARVK TVDFNQMAAR QQAFGTRYLD EVR
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