| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1790 |
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| Symbol | |
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| ID | 1220628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1925341 |
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| End bp | 1926423 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238182 |
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| Product | transcription regulator protein |
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| Protein accession | NP_519911 |
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| Protein GI | 17546509 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.678671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.041815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA GCATCAAGGA CGTGGCGACG CACGCCGGCA TCTCGATTGC CACGGTCTCG
CGCGCCGTCA ACGCGCCGGA GCGCGTGAGC CCCGAGACGC TGGCGCGCGT GCAGGCCGCC
ATGGACGCGC TGCAATACCG CCCGAACGCG CTGGGCCGCC AGCTGCGCGC CGTGCGCACC
GGCCTGGTGG GCGTGGTGCT GCCGTCGCTG GCCAACCCGG TGTTCGCCGA ATGTCTGCAG
GGCATCGACG AGGCCGCGGC GGCGAGCGGC CAGCGCGTGA TGCTGATGAC CACGGCCTAC
GACCGCGAGC GCGAGGCCCG CGCCATCGAG ACCCTGCTGC AGCAGCGCGT CGACGGCCTG
GTCCTGACGG TGGCCGATGC CGCCGCCAAC CCCCACCTGG ATCGCCTGAA CGCCGAGCGC
GTGCCTTACG TGCTGGTCTA CAACGACACG CAGGGACGGC CGCGCATGCC CGCGCGCTGC
AGCGTGACGG TCGACAACCG CGCCGCGGCG CGTGACGCGA TCCGCGCGCT GCTGGGGCGG
GGGCACCGGC GCATCCGCAT GCTGACCGGC ACGCTGGCCG CTTCCGACCG GGCCGCGCTG
CGCCACGCCG GCTATCGCGA CGCGCTGGAG GCGGCCGGCA TCGCCGCGCA GCCGCCGGTC
GAGATCGACT TCAACGCGGA AGCCCTGGCG AGCGCCGAGC TGGACCGCCT GCTGGCCGCG
CCGCGGCCCA CCGCCGTGTT CTGCAGCAAT GACCGGCTGG CCCTGCTGGC CATCGGCGCA
CTGCGCACGC GCGGCCTGCG CGTGCCGGAA GACCTCAGCG TGATCGGCTT CGACGGCCTG
GCGATGGGCC AGTGGCTGTC GCCGACGCTG GCGACGGTGG CGCAACCGCA CCGGCAGATC
GGCATCGATG CGGCCCAGGC GCTGGCCCGG CGCATCGCCG GCGAGACCGT GCCGCCGATC
ACGCTGCCGC ACCGCCTGCT GCCCGGCGGC ACGCTGGCCG AGGCGCCCGC CACGTCGGCC
GATCCAGATT CCGATTCCAC CGGTTTTTTC CCCACGTCTG ATACGCAAGG AGCGTCTCGA
TGA
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| Protein sequence | MASSIKDVAT HAGISIATVS RAVNAPERVS PETLARVQAA MDALQYRPNA LGRQLRAVRT
GLVGVVLPSL ANPVFAECLQ GIDEAAAASG QRVMLMTTAY DREREARAIE TLLQQRVDGL
VLTVADAAAN PHLDRLNAER VPYVLVYNDT QGRPRMPARC SVTVDNRAAA RDAIRALLGR
GHRRIRMLTG TLAASDRAAL RHAGYRDALE AAGIAAQPPV EIDFNAEALA SAELDRLLAA
PRPTAVFCSN DRLALLAIGA LRTRGLRVPE DLSVIGFDGL AMGQWLSPTL ATVAQPHRQI
GIDAAQALAR RIAGETVPPI TLPHRLLPGG TLAEAPATSA DPDSDSTGFF PTSDTQGASR
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