Gene RSc1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1784 
Symboltmk 
ID1220622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand+ 
Start bp1919866 
End bp1920483 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID637238176 
Productthymidylate kinase 
Protein accessionNP_519905 
Protein GI17546503 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.378428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.509643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AGTTCATCAC ATTCGAAGGC ATCGACGGCG CGGGCAAGAG CACGCACCTG 
GCGTGGTTCG CCCAGCAGCT CGAAGCGCGG CTGGCGCCGC AGGGCAGGAA GGTGGTGGTG 
ACCCGCGAGC CGGGCGGCAC GCCGCTGGGC GAGCGCCTGC GCGAAGTGCT GCTGCACGAG 
CGCATGCACC TGGAGACCGA GGCGCTGCTG ATGTTCGCCA GCCGCCGGGA GCACATCGCC 
GAAGTGATTC AGCCGGCGCT GGAGCGCGGC GACTGGGTCA TCTCCGACCG CTTCACCGAT 
GCCACCTTCG CCTACCAGGG CGGGGGCAGG GGGCTGGCGA TCGAGCGGCT GGAGGCGCTG 
GAGCAGTGGG TGCAGCAGGG CCTGCAGCCG ACCAGGACAC TGCTGTTCGA TCTGGCGCCG 
GAGGTTGCCG CGGCCCGGCT GGCCGATGCG CGCACGCCCG ACAAGTTCGA GGCGGAGTCG 
GCCCAGTTCT TCGTCCGCAC GCGCGCCGAG TACCTGCGCC GCGCCGCCGC CGAACCGGGG 
CGTTTCGTCG TCATCGACGC CGCCCGCGCG CGCGACGATA TCCGGAAAGA CCTGGAGAAA 
CTGCTTGCAA GCCTTTGA
 
Protein sequence
MTGKFITFEG IDGAGKSTHL AWFAQQLEAR LAPQGRKVVV TREPGGTPLG ERLREVLLHE 
RMHLETEALL MFASRREHIA EVIQPALERG DWVISDRFTD ATFAYQGGGR GLAIERLEAL 
EQWVQQGLQP TRTLLFDLAP EVAAARLADA RTPDKFEAES AQFFVRTRAE YLRRAAAEPG 
RFVVIDAARA RDDIRKDLEK LLASL