| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1780 |
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| Symbol | |
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| ID | 1220618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1916440 |
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| End bp | 1917258 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637238172 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_519901 |
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| Protein GI | 17546499 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3332] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000400894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.836293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCTGA TTCTCACGGC CTGGCACGCG CACCCTGCCT ATGCGCTGGT GGTGGCCGCC
AACCGGGACG AATTCTATGA CCGCCCTGCC GCGCCGCTGG CGTGGTGGAG CGATGCGCCC
CACGTGCTGG CCGGGCGCGA CCTGGCCCAG GTGGTCGGTC ACGCGGGCAC CTGGATGGGC
ATGACGCGCG ACGGACGCTT CGCCGCGCTC ACCAACTACC GCGCCCCCTC CGAGCGGCGG
CCCGATGCCC GCTCGCGCGG CGAGCTGGTC GCCAATTTCC TGGCCGCCGA AGACGCCTCG
ATTCCCGCCT ACCTCGACCA GCTGAAGGCC CGCAACGGCG TCTACAACGG CTACAACCTG
CTGACCGCCA CGCGCGACGA ACTCTGGTGG ACCAGCAACC GCGCCGAGGC GCCGCGCCAG
CTCGCGCCCG GCGTGTACGG GCTGTCCAAC GCGCTGCTCG ATACGCCGTG GTTCAAGGTA
CGGCACCGTG TCGCCGCCTT CGCCGAGGCG CTGGCCGCCG ATACCGGCCG CCACGGCAAC
GCCATCGACG TGGCGCGCTA CCTCGACCTG CTGGCCGAGA CGCGCGAAGC CCCCCTCGGC
GCCCTGCCCG CCACCGGCGT GGCGCCGGAA TGGGAAAAGC TGCTGTCGGC CGCCTTCATC
CGCTCCCCGC GCTACGGCAC GCGCGCCAGC ACCGTGCTGC GCATCCGCCA CGACGGCTGC
TTCGACGTGA CCGAGCGGCG CTTCGACGCG CAGGGTCAGA TCGGCGAGAC GCGCTACCTG
GGCGTGCTCG ACGCAGTGAC CCAGGCCGAT ACGCCGTAA
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| Protein sequence | MCLILTAWHA HPAYALVVAA NRDEFYDRPA APLAWWSDAP HVLAGRDLAQ VVGHAGTWMG
MTRDGRFAAL TNYRAPSERR PDARSRGELV ANFLAAEDAS IPAYLDQLKA RNGVYNGYNL
LTATRDELWW TSNRAEAPRQ LAPGVYGLSN ALLDTPWFKV RHRVAAFAEA LAADTGRHGN
AIDVARYLDL LAETREAPLG ALPATGVAPE WEKLLSAAFI RSPRYGTRAS TVLRIRHDGC
FDVTERRFDA QGQIGETRYL GVLDAVTQAD TP
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