Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1777 |
Symbol | |
ID | 1220615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1912903 |
End bp | 1913730 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637238169 |
Product | putative lipoprotein transmembrane |
Protein accession | NP_519898 |
Protein GI | 17546496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000294533 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.702706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCC GTAATGCACC TCACGCAGTG GCATTGGCTT CCGTTCTTCT GCTGGCCGCG TGCGGTGGCG GTGGTGGTGA TGATTCCAGT GGCAGTGCAG CGAGCACGTC GAGCAGCAGC TCGGGCACGA CCGCCCAGAC CTCGCAGATC ACGGTGCAAG GAAGTGCGGT TGCCGTGACG GCAGACCCGC TGGCGGTCAT GTACATGGGC CCCAACGGGA GCTCCAGCAC GCTGTTCGGC TCGAACCCGC TGAACTCCGC CCGCAGCGCG GCGGCCTCCA GCCAGACCGT GATCGCGGGC GGCGGCTATA GCGCATTCAA CATCGGTTCG CTCGCCGTGA CCCTGACGCA AGGCACCGTT GCCGATGTGT CCGGCACCGC CGATTATCAG GTTGGCCGCT GGACCAACGG CCAGGGCAAG AACGTGGCGA CCATGTCCGC CAACCAGGGG GCGTATTACG TCGTGGGCAA ACCGCTGGCA CTCTCGACCA ATGCGAGCGG TACGTTCGCC TGCTCGCTGG CCGGCGCAAC GAAGCCGACG GCGGTGAGCG GTACGGTGGC ACCGGGCACG CTGACGGCGG CCACGGCCAC GATCGACAAG AGCACGCTCA GTGCCACGAT CACGCTGGCC TACTCCATCG GTGCGGACCA GGGTGCCACG ATGACCAAGA CGATGAACGT CAACAGCTTC TCGGCTGGCA GCGGTGCCGT GTTCGTTTCG AGCGTGCTAG GTTCCGATGC GACCAAGCCG CTGCTCGGCC TCGTCTACAC GGTCAAGGCG TCTTCGTCGG GCGACACGAG CGGCAGCGCG GTGCTGAGCT GCCAATAA
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Protein sequence | MQFRNAPHAV ALASVLLLAA CGGGGGDDSS GSAASTSSSS SGTTAQTSQI TVQGSAVAVT ADPLAVMYMG PNGSSSTLFG SNPLNSARSA AASSQTVIAG GGYSAFNIGS LAVTLTQGTV ADVSGTADYQ VGRWTNGQGK NVATMSANQG AYYVVGKPLA LSTNASGTFA CSLAGATKPT AVSGTVAPGT LTAATATIDK STLSATITLA YSIGADQGAT MTKTMNVNSF SAGSGAVFVS SVLGSDATKP LLGLVYTVKA SSSGDTSGSA VLSCQ
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