Gene RSc1773 details

Gene Information

• Locus tag: RSc1773
• ID: 1220611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1900302
• End bp: 1900751
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637238165
• Product: putative thioesterase protein
• Protein accession: NP_519894
• Protein GI: 17546492
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.927343
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGATCG AGGATTTCCG CCACGGCACG CCGCTGCGCG TGCGCTGGGC CGAGGTCGAT 
GCCCAGGGCA TCGTCTTCAA CGGCCACTAC CTGCTGTATG CGGACGTGTG CATCACCGAG 
TACTGGCGCG CCATCGGCGT GCGCTACCCG ACCGAGGTGG TGGAGGCGTT CGGCGTCGAT 
TTCTACGTGG TCAAGTCCAC GCTCGAATAC CATGCCTCCG CGCGCTTCGA CGACGTGCTC 
GACCTGCGCT GCCGCGTGGC GCGCCTGGGC CGCTCCAGCC TGCGCTTTAT CATCGAGATC 
TATCGCGGCG AGGGCGACGA CAGAGCGCAC CTCGTCACCG GCGAGGTCAT CTACGTGTGC 
GCCGATCCGG CCACGCAGAC GTCCGTGCCC GTGCCCGCCA GGCTGCGCGA GCGCATCGTC 
GATTTTGAAG TCCTGAAGCC CGAAACATGA 

 

Protein sequence

MAIEDFRHGT PLRVRWAEVD AQGIVFNGHY LLYADVCITE YWRAIGVRYP TEVVEAFGVD 
FYVVKSTLEY HASARFDDVL DLRCRVARLG RSSLRFIIEI YRGEGDDRAH LVTGEVIYVC 
ADPATQTSVP VPARLRERIV DFEVLKPET