| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1756 |
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| Symbol | pehB |
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| ID | 1220594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1878639 |
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| End bp | 1880747 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238148 |
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| Product | exo-poly-galacturonase signal peptide protein |
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| Protein accession | NP_519877 |
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| Protein GI | 17546475 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0518728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.59815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAAA GAAAAATGGG GCGTGGTGCC GCCCTGCTGC TGGCGGCGAT GCTGGCCGGT
GCGTTGGTAG CCTGCGGCTC GGGCGAGGGC GATGGCGCTT CCGGCTTGTC CGTTTCAGGC
GGCACCGCGC AGACGACCAC GCAGACGGTC GGCTCGACCT GCTCCCCGGT CAATGTGCGG
GCGACCAGCG GCACCCGCTC GACCGTGCCG CAGCATCCGT GCGTTCCGGC GCTCGCCTAT
GACGACACCA GCATCACGCT GGCCTGGAAC AAGCCGGACA TCTATGCCGA TGTGGCCGAT
TACAACGTTT ACATGAACGG GACGAAACTC GGCAGCGCAT CGGAAAACAA TGCGGTGCAT
TCCGTCGCGA AACGCTATAT CGATCGCTTT TATGCGGAGG ACACGGCGGG TTTTCACACC
AGAATGACCT TTCACAGCTT TCGCGTGACG GGGCTGGCTC CGGATACGGC TTATACCTTC
ACCATCCGGT CGGTGGATCG TTCCGGAAAG GAATCCGCCG ACAGCGTGCC CGTCGTGCAC
AGGACAGCCG CCGCTTTCAC GCGCGTCTAT GACGTGGCGA AACTGGGCGC CAGGGGCGAT
GGCGCGACGC TGAATACGGC CGTCATCCAG AAGGCGATCG ACGACTGCGC CGGCACGTCC
ACCACGGCGT ACGGGTGCAA GGTGCTGATT CCCGCCGACG ATGCGGGCGG CGCCGTGTTT
GTGAGCGGCG CCCTGTTCCT CAGAAGCAAC ATGACACTGG AGGTTGCCGA AGGCGCGACG
TTGCGCGGGT CCGCCGACGC GGCGGATTAC CCGCTCGCCA AGGGGTACCA GCTGTACAGC
TATTTCACCA ACGTGACGGA CGATCGCCGT CCGCCGTCGT TGCTGAATAC GCTCAGTCCC
GCGCACATGA ACGGCGCGAC GGCATTGGCC GACCACCAGG GCTACGACGA CAGGCGCGGG
GTGTTCAGCA ACATCCGGGT CACCGGCAAG GGCACGCTGG ACGGCAGCGG ATGGGTGCGC
CGCGGCACCG ACACGATCGA TGAGGTCGGC AACCGTCTCG CCAGCTTCGC GCCCGGCAAT
GCCAGCAAGT GGAGCACCCT CGGCGTGCTG GCCAAGCGCC AGATGCTCGC GGCCCAGGCC
GAAGCCGGCG GCACGCTCGA CTCGACCCAG AACGCGAACT ACTACAGCAA CCGCCGATCG
AGCCTTGCCA CCTTTCGCGG CACGCGCAAC CTCTATTTCG GCGATCTGAC GCTGACCAAC
CCGGCGCTCC ATGGCGTCAT GTTCATCGAG AGCGACAACA TGGTGTTCGC CAACACGGTC
ACGCAGACGT TCGATATCAA CAACGCGGAC GGCGTGGAAT TCGGCAACAG CAGCAACGCC
GTCGTGTTCA ACAATTTCAT CGACAGCGGC GACGACAACA TCAACTTTGC CGCCGGCCAG
GGCAAGAACT ATGAGGGGGG CACGCCCCAG CAGTACGCAT GGATCTTCAA CAACTACATG
CGCGAGGGCC ACGGGGGTGT GGTGGCCGGC AGCCATACCG GCGCGTGGAT CCAGGACATC
CTCGCCGAGG ACAACGTGAT GTTCATGACC GACAACGGGC TGCGCCTCAA GAGCACGCCG
GCCACGGGCG GCGGCGCGCG GCGCATCGTA TTCCGCGACA CCGCCATGCG GGAGGTCGGC
ACCAAGAACA GCGTGTCGGC AGGGGGGCAG ACCTTCGCCA ACAACACCAA TGGCAGCCCG
TTCATTCTCA CGTTGTCGTA TAGCGCCGGC AGCAACGTGT TCGACAACGC AGCCGCCGCG
GCCCAATTCC GCGATATCAC CGTCAATCGC GTGACGATCG ACAACGGCAA TCCGGGCACC
GGCGGGGCGA TGATCTCGGT GGACGGCTAT GACGGCACCG ATCCGTCGCT GGGCTATCCC
GAAACGTTCC ACGAGAACGT GCTGTTCGAC ACGGTGAGCA TCACCCGCGC GAAGCCCGCC
AGCATCAGCC GCCTCAAGGA CAGTACCTTC AAGGACGTGA CGATCACGAA CTGGGGCACA
GCGGCGACGC CCTGGTCGAT TCGCGACGCT TCCGGGCTGA CCTTCAGCAA CGTGAAGCCG
GCGCCCTAG
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| Protein sequence | MRQRKMGRGA ALLLAAMLAG ALVACGSGEG DGASGLSVSG GTAQTTTQTV GSTCSPVNVR
ATSGTRSTVP QHPCVPALAY DDTSITLAWN KPDIYADVAD YNVYMNGTKL GSASENNAVH
SVAKRYIDRF YAEDTAGFHT RMTFHSFRVT GLAPDTAYTF TIRSVDRSGK ESADSVPVVH
RTAAAFTRVY DVAKLGARGD GATLNTAVIQ KAIDDCAGTS TTAYGCKVLI PADDAGGAVF
VSGALFLRSN MTLEVAEGAT LRGSADAADY PLAKGYQLYS YFTNVTDDRR PPSLLNTLSP
AHMNGATALA DHQGYDDRRG VFSNIRVTGK GTLDGSGWVR RGTDTIDEVG NRLASFAPGN
ASKWSTLGVL AKRQMLAAQA EAGGTLDSTQ NANYYSNRRS SLATFRGTRN LYFGDLTLTN
PALHGVMFIE SDNMVFANTV TQTFDINNAD GVEFGNSSNA VVFNNFIDSG DDNINFAAGQ
GKNYEGGTPQ QYAWIFNNYM REGHGGVVAG SHTGAWIQDI LAEDNVMFMT DNGLRLKSTP
ATGGGARRIV FRDTAMREVG TKNSVSAGGQ TFANNTNGSP FILTLSYSAG SNVFDNAAAA
AQFRDITVNR VTIDNGNPGT GGAMISVDGY DGTDPSLGYP ETFHENVLFD TVSITRAKPA
SISRLKDSTF KDVTITNWGT AATPWSIRDA SGLTFSNVKP AP
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