| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1754 |
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| Symbol | livF |
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| ID | 1220592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1877138 |
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| End bp | 1877857 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238146 |
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| Product | amino-acid ATP-binding ABC transporter protein |
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| Protein accession | NP_519875 |
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| Protein GI | 17546473 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.395881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.658202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCA CCACGCCCAT GCTCGAAGTG CGCGGCCTGC ACGCGTACTA CGGCAAGAGC
CACATCCTGC ACGGCGTCGA CCTGCACGTG GGGGAGGGCG AGATCGTCGC CCTGCTCGGC
CGCAATGGCG TGGGCCGCTC GACGCTGGCC AAGTCCATCA TGGGCATGGT CCGCTGCGAG
GGGCACATCC TGCTGCGCGG CAAGGACGTG CGCGGCCTGC GCACCTTCGA GGTGGCGCAC
CGGGGCATCG GCTACGTGCC CGAGAACCGC GACATCTTCC CGACCCTGAC CGTGCGCCAG
AACCTGCTGC TGGGGGAGAA GCGCAACCCG CGCCAGCCGA GGCCGCGCTG GCAGTTCGAC
GACATGTACC GCCTGTTCCC TCGCCTCAAG GAGCGTGAGC ACACGCCGGC CGGCGTGCTC
TCCGGCGGCG AGCAGCAGAT GCTGACGCTC TGCCGCACGC TGATGGGCGA CCCGGATTTC
GTCATCATCG ACGAGCCGAC CGAAGGGCTG GCGCCGCTGA TCGTCGCGCA GGTTGGCGAA
TACCTGAAGA CGCTCAAGGC GCGGGGCATT TCGGTGCTGC TGGTCGAGCA GAAGCTGGCC
ATCGCGCTCG ATATCTCGCA GCGGGTGTAT GTGATGGGGC ATGGCCAGAT CGTCTTCGAG
GGGACGCCTG CCGATCTGAA GGCGGATGCG CGGGTTCGGC AGGAGTGGCT GGAGGTCTAG
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| Protein sequence | MAATTPMLEV RGLHAYYGKS HILHGVDLHV GEGEIVALLG RNGVGRSTLA KSIMGMVRCE
GHILLRGKDV RGLRTFEVAH RGIGYVPENR DIFPTLTVRQ NLLLGEKRNP RQPRPRWQFD
DMYRLFPRLK EREHTPAGVL SGGEQQMLTL CRTLMGDPDF VIIDEPTEGL APLIVAQVGE
YLKTLKARGI SVLLVEQKLA IALDISQRVY VMGHGQIVFE GTPADLKADA RVRQEWLEV
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