| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1750 |
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| Symbol | livJ |
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| ID | 1220588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1872682 |
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| End bp | 1873935 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238142 |
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| Product | Leu/Ile/Val-binding precursor signal peptide protein |
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| Protein accession | NP_519871 |
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| Protein GI | 17546469 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.531114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGT TCCGTCCGTT GATCGTGGCC GTTGCAAGTG TCGCGGCAAT CGGTGGAGGG
CTGGCAAGCG CCGCCGCATC CGCCGCCGAG ACCGTCAAGA TCGCCTGGAT CGATCCGCTC
TCCGGCCTGA TGGGCGCGCT GGGCCAGAAT CAGCTGCGCA GCTGGCAGTA CATCGCCGAG
CTGGCCACGC AGAAGAACTG GGCCGGCGAC GGCACCCGGT TCGAGGTGGT GGGCTTCGAC
AACAAGCTCT CGCCGCAGGA GAGCCTGACG GTGCTCAAGC AGGTGGCCGA CCAGGGCATC
CACTACATCG CGCAGGGCAA CGGCTCCAGC GTGGGCATGG CGCTGGAGGA CGCGGTCGCC
AAGTACAACG AGCGCAACCC GGGCAAGGAG ATCGTCTACC TGAACTACGC GGCGGTCGAC
CCGGACATGA CCAACGGCAA GTGCAACTAC TGGCACTTCC GCCTGGACGC GAACTCCGAC
ATGAAGATGG AGGCCCTGAC CAGCTACCTG GCCAAGGACC CGGGCGTCAA GAAGGTCTAC
CTGATCAACC AGAACTACTC GTTCGGCCAC CAGGTGGCGC GCGCGGCCAA GGCGTATCTC
AAGCGCAAGC GCCCCGACAT CGAGATCGTC GGCGAAGACC TGCATCCGCT GGCGCAGGTG
AAGGATTTCT CGCCGTACGT GTCGAAGATC AAAGCGTCGG GCGCCGATAC CGTCATCACC
GGCAACTGGG GCAGCGACCT GGCGCTGCTG ATCAAGGCCG GCAAGGATGC GGGCCTGAAC
GCCAATTTCT ACACCTACTA CGCCTCGAGC ACCGGCGTGC CGACCGCCAT GGGCCCCGCC
GGCGCCGACC ACGTCAAGTA CGTCGGCTAC TGGAACGTCA ACAACGACGG CTTCAAGGGC
GCCGACATCG TCGAGGGCTA CAAGAAGAAG TACAACGACG ACTACTACCT GATGGCGTCG
TACACCGGCA TCGCGCTGCT GGCCAAGGCC GTCAAGCAGG CCCGGTCCGC CGAGCCGGGC
AAGGTCGCCC GGGCCCTGGA GGGGATGAAG GTCGACAGCC TGAACGGCCC GTTCGAGATG
CGCGCCTCCG ACCACCAGGG CCAGCAGCCG CTCTACATCG CCACCTGGAA GAAGACCGAC
GGCAAGACCG TGCGCTTCGA CCAGGAGAAC ACCGGCTACG GCTGGAGGAC CGATGCGGTG
CTCGACCAGT ACATCGCGTC GCAGCCGACC TCCTGCCAGA TGAAGCGCCC CTGA
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| Protein sequence | MTKFRPLIVA VASVAAIGGG LASAAASAAE TVKIAWIDPL SGLMGALGQN QLRSWQYIAE
LATQKNWAGD GTRFEVVGFD NKLSPQESLT VLKQVADQGI HYIAQGNGSS VGMALEDAVA
KYNERNPGKE IVYLNYAAVD PDMTNGKCNY WHFRLDANSD MKMEALTSYL AKDPGVKKVY
LINQNYSFGH QVARAAKAYL KRKRPDIEIV GEDLHPLAQV KDFSPYVSKI KASGADTVIT
GNWGSDLALL IKAGKDAGLN ANFYTYYASS TGVPTAMGPA GADHVKYVGY WNVNNDGFKG
ADIVEGYKKK YNDDYYLMAS YTGIALLAKA VKQARSAEPG KVARALEGMK VDSLNGPFEM
RASDHQGQQP LYIATWKKTD GKTVRFDQEN TGYGWRTDAV LDQYIASQPT SCQMKRP
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